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… With collaborative user projects, the JGI’s Plant Program delves into the natural world’s potential to … to current problems facing humanity. A major focus are biofuel feedstock species and plant-microbe interactions, advancing efforts to … improve the accuracy of functional predictions and speed up genome analysis. Additionally, the Plant Program is …

… “Adopt a Genome” is an informal program for faculty to “claim” the … faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This opportunity, provided … A primary purpose of this project is to bring educators from a broad range of …

… The purpose of this policy is to establish communication norms around … that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … assembly, analysis, annotation, verification, creation of genome browsers, etc. The users, collaborators, and JGI …

… group aims at improving our collective understanding of ecological and evolutionary parameters driving virus:host dynamics in environmental microbial communities. This … involves both experimental and computational exploration of uncultivated viral diversity, characterization of …

… Plants are complex organisms that harbor a fantastic diversity of cell types and associated organisms, including fungal and … tools to study this complexity, including single-cell and spatial transcriptomics barcode-based genetics (RB-TnSeq), … fungi, viruses. Resident viruses can be found in a myriad of bacterial strains, whereby they can modulate host …

… joined the JGI in 2017, he brought with him 20 years of industry experience — and an opportunity to expand the … computer analysis coupled with liquid chromatography mass spectrometry. We offer accessible, AI-ready large-scale data repositories for genome information with analysis tools for mining and …

… research is focused on the discovery and characterization of novel bacterial, archaeal and eukaryotic microbes and … to identify new divergent lineages and expand the Tree of Life. We then investigate the coding potential to find … discovering and characterizing giant viruses, which possess genomes and particle sizes that rival those of cellular …

… DAN: Hello, everyone, and Welcome back for Episode 14 of Natural Prodcast . There’s been a lot going on, so I took … off today with my interview with the Director of the Joint Genome Institute and head of the Secondary Metabolites … help the Society grow. And so I’ve been the chair of the publications committee for the last, what is it now, five …

… DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about natural … and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … genome mining over the years, and we talk about a new publication out of JGI in Nature Biotechnology , for which …

… Research in the Eloe-Fadrosh group focuses on using genome-resolved metagenomic approaches to identify and … develop computational approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial … ecosystem function.  The Environmental Genomics group also hosts the Viral Genomics group . Research Team    …

… Research in the Woyke laboratory focuses on the utility of single-cell methods to access genetic material of uncultivated taxa of interest. One such effort is targeted at environmental … in the strongly biased representation of sequenced genomes in the public domain, the bulk of which belong to …