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Publication Policy
The JGI has a strong interest in seeing that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … of collaborators and users. For example if, by agreement with the collaborator, JGI staff take a lead role in the …
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Publications
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Partnerships: Adopt-A-Genome
… faculty to “claim” the JGI’s unpublished microbial genomes, with the expectation that faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This opportunity, provided by the Department of …
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New Lineages of Life Group
… and phylogenomics) and machine learning to identify new divergent lineages and expand the Tree of Life. We then … and biogeochemical cycles. Research Team    … A complete publication list available at Google Scholar. Schulz, C … Microbiome. 5 (1), 1-6 Schulz et al. (2017) Giant viruses with an expanded complement of translation system …
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Sequencing Submission Requirements for DNA Synthesis
When submitting sequences to the JGI DNA Synthesis program, please include the following items: … Sequence files for all constructs should be …
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FICUS
The Facilities Integrating Collaborations for User Science (FICUS) call … applications will focus on high-risk/high-payoff proposals within the focused topic areas that can be completed on an … provides customized analysis, the JGI also participates in publication of results. … Proposals for the annual FICUS …
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Fungal & Algal Program
… to unlock their potential for bioenergy, environmental sustainability, and bioproducts. By sequencing and analyzing the … carbon management, and environmental sustainability. Fungi, with million species, are essential for ecosystem … international research team in collaboration with the JGI. Conserved Fungal Genes of Unknown Function offer a …
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Microbial Program
The JGI’s Microbial Program focuses on using cutting-edge sequencing, annotation and analysis … Studying bacteria and archaea, including those associated with microeukaryotes, enhances our understanding of … sequencing technologies to explore microbial diversity — with an emphasis on bacteria and archaea, and including …
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Functionally conserved enhancers with divergent sequences in distant vertebrates
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FICUS Overview
The Facilities Integrating Collaborations for User Science (FICUS) … Previously, researchers had to apply to each facility with separate review schedules and selection processes, … provides customized analysis, the JGI also participates in publication of results. … All proposals undergo technical …
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Data Policy
… and released by the US Department of Energy (DOE) Joint Genome Institute (JGI) are subject to the following Data … visible and available in JGI systems. Users not involved with the proposal under which the data were generated (e.g. … PIs or co-PIs) who wish to include use-restricted data in publications, or who wish to redistribute data in any way …
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Synthesis
The Joint Genome Institute's DNA Synthesis Platform capabilities support researchers exploring how to convert sequence into functional assessments. … and assembling physical DNA constructs that can then be functionally characterized.    We provide custom DNA …
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