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… uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work … that govern ecosystem processes. This research provides insights into microbial diversity and metabolic potential, … a snapshot of microbial diversity and their metabolic functional potential. This research enables us to better …

… that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … (see Auspice Statement below) for the generation of sequence or metabolomic data, DNA synthesized, and any … analysis, and interpretation of sequence, metabolomics, and functional genomics data types as well as in advanced …

… faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This opportunity, provided … and skills necessary to extract meaningful biological insights from sequence data, employing IMG data and tools …

… analysis techniques to explore the vast and diverse world of microbes. Studying bacteria and archaea, including those … cycling and inter-organismal interactions. These insights are crucial for addressing key environmental … three domains of life. It provides tools for analyzing the functional capability of microbial communities based on …

The JGI’s DNA Synthesis Program supports a wide range of projects, from single-gene synthesis to the synthesis of … solutions.  The program has been a pioneering effort in functional genomics since 2012, with a focus on addressing … clade-specific orthology/paralogy relationships as well as insights into clade-specific novelties and expansions.  … …

The IMG group owns and maintains integral components of JGI’s production workflow, … and analysis of (meta)genomic, (meta)transcriptomic, and functional genomic data and serving them to users via the …

The JGI’s Metabolomics Program works to uncover the roles of small molecules in biological systems, linking them with … microbes, and understanding microbiome interactions. The  insights derived are crucial for advancing the bioeconomy, … with gene expression, providing deeper insights into functional genomics. A key focus is understanding the …

Micro-Scale Applications group explores the genetic makeup of natural microbial communities using a variety of … the quality of single-cell genomes and directly link functional information with individual cells. Research Team  … activity (BONCAT+FACS). To provide additional functional insights into microbial genomes, the JGI now uses laser …

… and protein folding models, to improve the accuracy of functional predictions and speed up genome analysis. … communities affect plant growth and productivity. These insights have the potential to inform strategies that … the ability to discover syntenic orthologs, generate publication quality graphics and explore pangenome views of …

DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … cluster. And so we’ve learned a lot about how biosynthesis pathways happen, just by being able to find one kind of gene …

The CSP Functional Genomics call is to enable users to perform state-of-the-art functional genomics research and to help them translate genomic information into biological function.  The emphasis is on …