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Publication Policy
… The purpose of this policy is to establish communication norms around JGI contributions, … that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … Upon request, JGI staff will provide Users with a list of contributors and their corresponding ORCiD and relevant …
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Metabolomics Program
… The JGI’s Metabolomics Program works to uncover the roles of small molecules in biological … supports foundational research related to soil nutrient cycling and health, terrestrial biogeochemical processes, … Program is focused on understanding the critical roles of metabolites in living systems, particularly as they …
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Mission
… JGI Mission As a U.S. Department of Energy Office of Science user facility, we provide … large-scale AI-ready data and professional expertise to support the global research community in studies of complex biological and environmental systems. We optimize our … and manufacturing. Genomic science lies at the heart of biology, providing the foundational knowledge to …
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Publications
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Microbial Program
… cutting-edge sequencing, annotation and analysis techniques to explore the vast and diverse world of microbes. Studying bacteria and archaea, including those … enhances our understanding of terrestrial biogeochemical cycling and inter-organismal interactions. These insights …
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Partnerships: Adopt-A-Genome
… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s unpublished microbial genomes, with the … faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This opportunity, provided … A primary purpose of this project is to bring educators from a broad range of …
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Viral Genomics Group
… critical ecosystem functions and affect global nutrient cycling, however they do so under strong constraints exerted … group aims at improving our collective understanding of ecological and evolutionary parameters driving virus:host … and host cell take-over by viruses, and attempts to evaluate ecosystem-level impacts of viral infections. The …
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Secondary Metabolites Program
… Secondary Metabolites Program focuses on the exploration of secondary metabolites across bacteria, fungi, algae and … for fundamental growth, provide critical advantages to the organisms producing them, and are often involved in … nutrient acquisition and communication. Studying how these compounds are biosynthesized and their roles in the …
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Plant Program
… user projects, the JGI’s Plant Program delves into the natural world’s potential to address global … by exploring plants’ role in capturing carbon, detoxifying soils, interacting with other organisms, and adapting to … to current problems facing humanity. A major focus are biofuel feedstock species and plant-microbe interactions, …
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Natural Prodcast Episode 2: The Primer, Part 2
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … so we’ve got glycosides being made into sugar-containing compounds, and terpenes come from isoprenes, and polyketides … it wasn’t unusual to see sort of weird growths on livestock due to you know, bacterial or fungal infections. Yeah, okay. …
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Institutional User Agreements
… — before any work can begin, including the submission of samples for sequencing, or the submission of sequencing … Appendix identifies the type of work or specific proposal to be covered under the Agreement. The signing official must … rights in technical data, project reporting to the DOE, and publication requirements. An official with authority is …
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Fungal & Algal Program
… The Fungal & Algal Program explores the vast diversity of fungi and algae to unlock their potential for bioenergy, environmental … that enable fungi and algae to play a vital role in carbon cycling, biodegradation and biogeochemistry. This research … and advanced genomic analysis to explore the rich diversity of fungi and algae. These organisms play a critical role in …
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