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Research in the Woyke laboratory focuses on the utility of single-cell methods to access genetic material of … The “Great Plate-Count Anomaly” first described by Stanley and Konopa in 1985, which highlights our skewed … … Research Interests … Former Lab Members … Selected Publications … For further details, please reach out to the …

JGI has a strong interest in seeing that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … interpretation of sequence, metabolomics, and functional genomics data types as well as in advanced assembly and …

We use multi-omics (metagenomics, metatranscriptomics, single cell genomics and phylogenomics) and machine learning to … and biogeochemical cycles. Research Team    … A complete publication list available at Google Scholar. Schulz, C …

… faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This opportunity, provided by the Department of Energy Joint Genome Institute, builds … with some of the latest developments in microbial genomics, metagenomics, and computational biology, and to …

… technology in order to enhance the quality of single-cell genomes and directly link functional information with … the first quantitative Stable Isotope Probing (SIP) Metagenomics pipeline that utilizes internal analytical …

… the natural world’s potential to address global challenges by exploring plants’ role in capturing carbon, detoxifying … the ability to discover syntenic orthologs, generate publication quality graphics and explore pangenome views of …

… associated viruses and mobile genetic elements. Beyond exploring and characterizing microbial diversity, work in … approaches to assess microbial activity across ecosystems.  By studying microbial communities and their interactions, … such as quantitative stable isotope probing (qSIP)-metagenomics and metatranscriptomics, to metagenomics and …

… to cutting-edge capabilities to help advance their science by generating data in three overarching categories: … automation, and further advancing sequence applications, single cell genomics, DNA synthesis, and metabolomics.   … Deputy …

… datasets, particularly for uncultivated microorganisms, by sequencing large populations of bacteria and archaea in their natural environments using single cell approaches. This includes linking strain-level genetic …

Biology is currently experiencing a revolution brought on by rapid developments in genomics and other omics … Bowers RM, et al. (2017) Minimum information about a single amplified genome (MISAG) and a metagenome-assembled … Science 344(6186):909-13 … Research Efforts … Selected Publications … For further details, please reach out to the …

… beyond what each of these facilities could generate by itself.   Accepted projects must address or be otherwise … provides customized analysis, the JGI also participates in publication of results. … Proposals for the annual FICUS … Accessing Resources at Multiple DOE User Facilities with a Single Proposal describes the resources available from the …