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Publication Policy
… that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to produce manuscripts for publication … (see Auspice Statement below) for the generation of sequence or metabolomic data, DNA synthesized, and any …
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Publications
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Partnerships: Adopt-A-Genome
… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s unpublished microbial genomes, with the … faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This opportunity, provided …
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Experimental evolution of extremophile resistance to ionizing radiation
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Metagenome Program
… uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work … diversity, work in the Metagenome Program uses several experimental approaches to assess microbial activity across … and virus-microbe interactions, over ecological and evolutionary time scales.The Metagenome Program combines …
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Institutional User Agreements
… — before any work can begin, including the submission of samples for sequencing, or the submission of sequencing … Appendix identifies the type of work or specific proposal to be covered under the Agreement. The signing official must … rights in technical data, project reporting to the DOE, and publication requirements. An official with authority is …
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FICUS
… for researchers to request the capabilities and expertise of multiple DOE National User Facilities in one research … provides customized analysis, the JGI also participates in publication of results. … Proposals for the annual FICUS … a researcher, briefly describing the project motivation, experimental design, capabilities to be used and DOE mission …
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Single Cell Research Group
… is of high value to establish models and hypotheses, experimental data is critical to further test such … Biotechnol 35(8): 725-731 (2017). Woyke T . & Rubin E.M. Evolution. Searching for new branches on the tree of life. … … Research Interests … Former Lab Members … Selected Publications … For further details, please reach out to the …
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Natural Prodcast Episode 13: Francisco Barona Goméz
… bright guy who’s been thinking for a long time about the evolution and natural products systems. This conversation … use for BGCs. DAN UDWARY: It’s sort of a database of known experimentally validated natural product clusters. FRANCISCO … of natural product biosynthesis in bacteria ” The ActDES publication came out after we talked. It looks like a great …
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Viral Genomics Group
… at improving our collective understanding of ecological and evolutionary parameters driving virus:host dynamics in environmental microbial communities. This involves both experimental and computational exploration of uncultivated … abundant ocean viruses.  Nature . 537:689-93. … Selected Publications … For further information contact the Group …
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Natural Prodcast Episode 12: Nadine Ziemert
… … DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … And I found her review in natural product reports on the evolution of genome mining and microbes with Mohammad … Usually, in a lot of cases, we still have to go through publications to get proteins, and their functions, and all …
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Data Policy
Data produced and released by the US Department of Energy (DOE) Joint Genome Institute (JGI) are subject to the following Data Policy. It is our mission to support … PIs or co-PIs) who wish to include use-restricted data in publications, or who wish to redistribute data in any way …
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