Search

… and other omics technologies.  The exponential growth of DNA sequencing data, coupled with recent computational … with geNomad. Nat Biotechnol . Epub. Neri U. et al. (2022) Expansion of the global RNA virome reveals diverse clades of … Science 344(6186):909-13 … Research Efforts … Selected Publications … For further details, please reach out to the …

… that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … (see Auspice Statement below) for the generation of sequence or metabolomic data, DNA synthesized, and any … Please include the appropriate Auspice Statement in any external publications, and include proposal Award DOIs following …

Microbes drive critical ecosystem functions and affect global nutrient cycling, however they do so under strong … group aims at improving our collective understanding of ecological and evolutionary parameters driving virus:host … abundant ocean viruses.  Nature . 537:689-93. … Selected Publications … For further information contact the Group …

… analysis techniques to explore the vast and diverse world of microbes. Studying bacteria and archaea, including those … the program offers single-cell sequencing, resequencing, RNA sequencing and epigenomics. Expansion of sequence space:  The JGI generates reference …

… … DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast– a … of the different actions, then we can say, OK, there is an expansion, you have two copies. And then you ask the … of natural product biosynthesis in bacteria ” The ActDES publication came out after we talked. It looks like a great …

… faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This opportunity, provided … Microbiol Resour Announc.  … Objectives … What is IMG/M … Publications … Access to the microbial genomes and …

… preparation tools, high molecular-weight DNA extraction and RNA preparation.  JGI sample QC protocols can be found here … … Tips for High Molecular Weight DNA extraction: … RNA Extraction Protocols: … iTag protocols: …

Below is a brief description of the process needed to prepare and ship samples for … JGI sample QC requirements and protocols Obtaining DNA and RNA of suitable quantity and quality has been the rate-limiting …

… uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work … microbial ecosystems.  The Program also aims to build a global-scale catalog of viral, microbial, and microeukaryote … and viral activity, transcription regulation, and noncoding RNAs in microbiomes. The insights from this work have the …

The JGI’s DNA Synthesis Program supports a wide range of projects, from single-gene synthesis to the synthesis of … focusing on developing genetic systems that can address global energy and environmental challenges. The program … as well as insights into clade-specific novelties and expansions.  … ICE is an open source registry platform …