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New Lineages of Life Group
… research is focused on the discovery and characterization of novel bacterial, archaeal and eukaryotic microbes and viruses in environmental sequence data. We use multi-omics (metagenomics, metatranscriptomics, single cell genomics and phylogenomics) and machine …
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Publication Policy
… The purpose of this policy is to establish communication norms around JGI contributions, … recognized and credited for their work, while also adhering to the authorship policies of the journal in which the … that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to …
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Fungal & Algal Program
… Program explores the vast diversity of fungi and algae to unlock their potential for bioenergy, environmental sustainability, and bioproducts. By sequencing and analyzing the genomes of these organisms, the program investigates the … sequencing technologies and advanced genomic analysis to explore the rich diversity of fungi and algae. These …
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Partnerships: Adopt-A-Genome
… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s … faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This … A primary purpose of this project is to bring educators from a broad range of disciplines …
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Environmental Genomics Group
… Research in the Eloe-Fadrosh group focuses on using genome-resolved metagenomic approaches to identify and characterize genomic information from … computational approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial … focuses on the assembly of metagenomic sequence data into microbial genomes, which is of fundamental value to …
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Metagenome Program
… The Metagenome Program uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work … on the high-throughput sequencing of microbial communities to uncover the complex interactions and functions that shape … and virus-microbe interactions, over ecological and evolutionary time scales.The Metagenome Program combines …
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Microbial Program
… The JGI’s Microbial Program focuses on using cutting-edge sequencing, annotation and analysis techniques to explore the vast and diverse world of microbes. Studying bacteria and archaea, including those … Program focuses on using advanced sequencing technologies to explore microbial diversity — with an emphasis on …
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Publications
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Evolutionary transition to the ectomycorrhizal habit in the genomes of a hyperdiverse lineage of mushroom‐forming fungi
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Natural Prodcast Episode 13: Francisco Barona Goméz
… DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s … ActDES, which is a curated database of actinobacteria for evolutionary studies, and hopefully we can catch him again … Episode Transcript … of natural product biosynthesis in bacteria ” The ActDES publication came out after we talked. It looks like a great …
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Data Policy
… Data produced and released by the US Department of Energy (DOE) Joint Genome Institute (JGI) are subject to the following Data Policy. It is our mission to support … PIs or co-PIs) who wish to include use-restricted data in publications, or who wish to redistribute data in any way …
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Natural Prodcast Episode 10: A Primer on Genome Mining
… DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural … and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … ALISON TAKEMURA: Hmm. Well, I think, I mean from an evolutionary perspective, I would think that genes that are …
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