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New Lineages of Life Group
… Our research is focused on the discovery and characterization of novel bacterial, … and phylogenomics) and machine learning to identify new divergent lineages and expand the Tree of Life. We then investigate the coding potential to … which challenge our understanding of viral complexity and evolution Our research focuses on discovering and …
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Single Cell Research Group
… Research in the Woyke laboratory focuses on the utility of single-cell methods to access genetic … material of uncultivated taxa of interest. One such effort is targeted at environmental cells that are from candidate phyla, major branches in the phylogenetic tree without cultivated …
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Publication Policy
… The purpose of this policy is to establish communication norms around JGI contributions, ensure that all … research project are appropriately recognized and credited for their work, while also adhering to the authorship … that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to …
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Natural Prodcast Episode 10: A Primer on Genome Mining
… and scientists of secondary metabolism. Welcome back for our second season of Natural Prodcast. This first … and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … do some sort of slightly novel chemistry. That’s just how evolution works. So if secondary metabolism is really …
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Mining New Frontiers: The Critical Minerals and Materials Joint Call
… proposal call . This represents a unique opportunity for researchers to request the capabilities and expertise of both national user facilities in one research proposal.  Submit … capabilities, they then ship samples—such as DNA and RNA for sequencing—to JGI. Users are responsible for covering …
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CSP New Investigator Call
… The CSP New Investigator Call is for investigators and research … initiatives new to the JGI. Projects must be independent of ongoing JGI proposals, and lead PIs cannot have been lead PI … All proposals will be externally peer-reviewed for scientific merit, DOE mission relevance , proposed data …
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Partnerships: Adopt-A-Genome
… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s unpublished … faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This … Reach the next generation of genome scientists and recruit new talent for biosciences.  Adopt-a-Genome has: ~20 faculty …
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Publications
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Natural Prodcast Episode 7: Ben Shen
… of secondary metabolism.  DAN: Hello, and welcome back for Episode 7 of the Natural Prodcast. It’s been about a … among many, many major discoveries since the genomic revolution, to me, as a natural part chemist for microbial … you have to have an index. You have to have the computer-searching systems. So one of the enabling technologies we …
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Natural Prodcast Episode 17: Cassandra Quave
… Dan Udwary: Hey everybody! Welcome back for Natural Prodcast episode 17. The guest we have this week … I think on COVID that we’re getting ready to submit for publication and have found some interesting hits for that as … mixed powders, my immediate thought was this is going to revolutionize plant natural products work. And I’m always …
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Natural Prodcast Episode 12: Nadine Ziemert
… And I found her review in natural product reports on the evolution of genome mining and microbes with Mohammad … looks like? NADINE ZIEMERT: First, usually, it’s a lot of searching the internet, searching literature, and making … Usually, in a lot of cases, we still have to go through publications to get proteins, and their functions, and all …
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Fungal & Algal Program
… The Fungal & Algal Program explores the vast diversity of fungi and algae to unlock their potential for bioenergy, environmental sustainability, and bioproducts. By sequencing and … The program’s focus is on large-scale sequencing efforts that survey the vast phylogenetic and ecological …
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