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The JGI has a strong interest in seeing that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … (see Auspice Statement below) for the generation of sequence or metabolomic data, DNA synthesized, and any …

The Fungal & Algal Program explores the vast diversity of fungi and algae to unlock their potential for bioenergy, environmental sustainability, and bioproducts. By sequencing and analyzing the … team in collaboration with the JGI. Conserved Fungal Genes of Unknown Function offer a collection of fungal genes …

Secondary Metabolites Program focuses on the exploration of secondary metabolites across bacteria, fungi, algae and … growth, provide critical advantages to the organisms producing them, and are often involved in defense, nutrient … pathway analysis, optimization of cell- and cell free-based expression platforms, tools and data for deciphering …

… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … genomics existed. This is before we’re even thinking of genes and connecting genes to molecules, which is something … you know, with organisms in the ocean, because I was always swimming or surfing. And you know, 25 hours a day we’re at …

… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s … faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This opportunity, provided …

… … DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast– a … bright guy who’s been thinking for a long time about the evolution and natural products systems. This conversation … of natural product biosynthesis in bacteria ” The ActDES publication came out after we talked. It looks like a great …

The JGI’s Metabolomics Program works to uncover the roles of small molecules in biological systems, linking them with … scientists are able to link metabolic activity with gene expression, providing deeper insights into functional … data.  This is a web-based service returns a list of scored reaction and gene matches associated with metabolites …

… … DAN: Hello, everyone, and Welcome back for Episode 14 of Natural Prodcast . There’s been a lot going on, so I took … explore the regulation of biosynthetic gene cluster expression in organisms. And that’s led by Hiroshi Otani … help the Society grow. And so I’ve been the chair of the publications committee for the last, what is it now, five …

… of these or any organisms. So developing good heterologous expression hosts like maybe in many fields now like in … So that’s– so that could be an example of convergent evolution, but just speculating there. But it’s interesting … up on previous Natural Prodcast episodes  here . Show Notes Publication: Suo Z et al. A Mesorhizobium japonicum quorum …

The focus of this group, in recent years, has been to bring generalizable technologies to bacteria, yeasts and algae previously with little to no genetic tools enabling heterologous expression and functional exploration.  The developed …

JGI Mission As a U.S. Department of Energy Office of Science user facility supported by the … the JGI went on to advance basic science by sequencing scores of microbial species as well as several model … cycles, as well as atmospheric particle formation and evolution.  Data from such studies is expected to advance a …