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… The purpose of this policy is to establish communication norms around … that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to produce manuscripts for publication and the responsibility for leading the efforts …

… faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This opportunity, provided … program is to: Build curiosity and illustrate the value of comparative genomic analysis Expose students to peer review … from sequence data, employing IMG data and tools for comparative analysis, visualization and interpretation using …

… develop computational approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial … communities and ecosystem function.  The Environmental Genomics group also hosts the Viral Genomics group . Research Team    … metagenomes, we gain insights into microbial interactions, evolution, and adaptation, ultimately informing strategies …

… to current problems facing humanity. A major focus are biofuel feedstock species and plant-microbe interactions, advancing efforts to … a plant based bioeconomy where plants are a major source of chemical production and contribute to a healthier planet … types to explore the molecular mechanisms behind phenotypic evolution. It also utilizes advanced tools, including deep …

… and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … bacteria, because it is so easy to sequence their genomes comparatively to especially plants. So yeah, so from there, … do some sort of slightly novel chemistry. That’s just how evolution works. So if secondary metabolism is really …

… research is focused on the discovery and characterization of novel bacterial, archaeal and eukaryotic microbes and … in environmental sequence data. We use multi-omics (metagenomics, metatranscriptomics, single cell genomics and phylogenomics) and machine learning to identify …

… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … but there you go. A tiny bit of background on this: Most of the machinery in any living organism are proteins, … They’re at the base of the animal kingdom, in terms of evolution. Because they’re sitting there, they tend to have …

… Dan Udwary: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … in more detail. Especially if you want to look at the evolution of these gene clusters, for example, you really … of hooks into IMG’s data. IMG being Integrated Microbial Genomics at JGI, a large data set of bacterial genomes. And …

… DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast– a … bright guy who’s been thinking for a long time about the evolution and natural products systems. This conversation … I think the important thing to remember is that, thanks to genomics, we now know that it is very hard to find stuff …

… uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work … drive innovations that could advance our understanding of Earth’s ecosystems. … and virus-microbe interactions, over ecological and evolutionary time scales.The Metagenome Program combines …

… DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … And I found her review in natural product reports on the evolution of genome mining and microbes with Mohammad … Usually, in a lot of cases, we still have to go through publications to get proteins, and their functions, and all …