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…   The Joint Genome Institute's Biodesign Platform capabilities support researchers exploring how to convert sequence into functional assessments. This is … Check out our organism-agnostic CRISPR gRNA design tool  … BOOST provides a suite of tools to automate sequence design for assembly by Gibson, …

… The Synthetic Biology lab is divided into a DNA synthesis production group and a synthetic biology … technologies to the broader community.  We focus our efforts on integrating database mining and sequence design … libraries.  We have developed and continue to improve automated assembly pipelines bringing in new technologies, …

… Software engineers in the Synthetic Biology Informatics Group develop, deploy, and … gRNA-SeqRET , an organism-agnostic CRISPR gRNA design tool BOOST , which provides a suite of tools to automate … For further details, please reach out to the Group Lead …

… a wide range of projects, from single-gene synthesis to the synthesis of entire chromosomes, advancing the … bioenergy solutions.  The program has been a pioneering effort in functional genomics since 2012, with a focus on … environmental challenges. Through innovative research in synthetic biology, the program enables the design and …

… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s unpublished … faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This … A primary purpose of this project is to bring educators from a broad range of disciplines …

… The purpose of this policy is to establish communication norms around JGI contributions, … research project are appropriately recognized and credited for their work, while also adhering to the authorship … that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to …

… Dan Udwary: You’re listening to the Department of Energy Joint Genome Institute’s Natural … and so my tools were not needed. It all worked out in the end because later I brought all those tools to Warp Drive … 10 or 20 genomes at once then we really need to have automated tools for this. Because well, you can’t do this …

… DAN UDWARY: Hey everyone and welcome back to a new session of Natural Prodcast. I’ve got two things I … Laboratory for Biosynthetic Studies. Brian and I are old friends and colleagues, having both graduated with our PhDs … plug– we want to plug these organisms into a drug discovery platform. So to me, the elephant in the room with regard to …

… data. We use multi-omics (metagenomics, metatranscriptomics, single cell genomics and phylogenomics) and machine learning to identify new divergent lineages and expand the Tree of Life. We then investigate the coding potential to find novel functions that may impact microbiome structure …

… The Facilities Integrating Collaborations for User Science (FICUS) call represents a unique opportunity for researchers to request the capabilities and expertise of multiple DOE … provides customized analysis, the JGI also participates in publication of results. …

… The CSP Functional Genomics call is to enable users to perform state-of-the-art functional genomics research and to … function.  The emphasis is on projects leveraging JGI’s Biodesign and ‘omics capabilities to enhance understanding of … All proposals will be externally peer-reviewed for scientific merit, DOE mission relevance , proposed data …

… systems, sheds light on nutrient cycling, and leads to the discovery of new molecules and pathways. The JGI Metabolomics Platform delivers rich metabolite profiles from diverse … details on the instrumentation we use and our methodology for metabolite analyses.  …