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Plant Program
… With collaborative user projects, the JGI’s Plant Program delves into the natural world’s potential to address global challenges by exploring plants’ role in capturing carbon, detoxifying soils, … to regulate Earth's carbon balance, to exploring the genetic basis of how plants have naturally adapted to varied …
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Plant Microbial Interactions Group
… fantastic diversity of cell types and associated organisms, including fungal and bacterial symbionts, detrimental microbial pathogens, and … single-cell and spatial transcriptomics barcode-based genetics (RB-TnSeq), and computational genomics to better … viruses. Resident viruses can be found in a myriad of bacterial strains, whereby they can modulate host …
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Publication Policy
… recognized and credited for their work, while also adhering to the authorship policies of the journal in which the … that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … acknowledgment (see Auspice Statement below) for the generation of sequence or metabolomic data, DNA synthesized, …
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Microbiome Data Science Team
… Biology is currently experiencing a revolution brought on by rapid developments in genomics and other omics technologies.  The exponential … data science.  Research in the Kyrpides group focuses on Microbiome Data Science and analysis of Big Data. The … and comparative analysis of thousands of archaeal and bacterial type strains ( GEBA-type strains project ), the …
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New Lineages of Life Group
… is focused on the discovery and characterization of novel bacterial, archaeal and eukaryotic microbes and viruses in environmental sequence data. We use multi-omics … We then investigate the coding potential to find novel functions that may impact microbiome structure and …
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Metabolomics Program
… Program works to uncover the roles of small molecules in biological systems, linking them with genomic data to … metabolomics fuels the discovery  of novel metabolites, genes, and proteins. It also enables exploration of energy and nutrient exchange, as well as microbial and plant responses to environmental changes. With advanced mass …
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Metagenome Program
… The Metagenome Program uses advanced sequencing technologies to decode the genomes of microbes in their … along with their associated viruses and mobile genetic elements. Beyond exploring and characterizing … By understanding how microbes contribute to ecosystem functions, the Program helps drive innovations that could …
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Plant Program User Advisory Committee
… The Plant Program Advisory Committee is chartered to offer … on the effective management and strategic objectives of the plant program. The committee serves as the program's key … and quality. The Committee does not perform management functions nor does it direct the Program's management team …
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Partnerships: Adopt-A-Genome
… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s … faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This … while nurturing a fresh cohort of users Reach the next generation of genome scientists and recruit new talent for …
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CSP Functional Genomics
… genomics research and to help them translate genomic information into biological function.  The emphasis is on projects … and ‘omics capabilities to enhance understanding of gene and genome function, particularly those not readily … and track record of the applicant.  Learn about the general review process or find details on the internal …
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Environmental Genomics Group
… Research in the Eloe-Fadrosh group focuses on using genome-resolved metagenomic approaches to identify and characterize genomic information from uncultivated microbes and viruses. We … our understanding of microbial ecology and metabolism by elucidating the functional potential of hard-to-culture …
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Publications
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