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… “Adopt a Genome” is an informal program for faculty to “claim” the … faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This … genomes claimed (or about one per student) Seven student-drafted articles accepted with over 20 more in draft Efforts …

… that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … (see Auspice Statement below) for the generation of sequence or metabolomic data, DNA synthesized, and any … assembly, analysis, annotation, verification, creation of genome browsers, etc. The users, collaborators and JGI …

And it actually was jumping onto the I ntegrated Microbial Genomes and Metagenomes, the IMG platform that JGI has that … so far is that you can have very, very disparate amino acid sequences for synthases that produce the same signal. So … up on previous Natural Prodcast episodes  here . Show Notes Publication: Suo Z et al. A Mesorhizobium japonicum quorum …

UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about natural … more than 50,000 genomes that we derived from meta-genome sequences. As always, you’ll find transcripts and show notes … and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, …

… analysis techniques to explore the vast and diverse world of microbes. Studying bacteria and archaea, including those … driven prioritization lists for laboratory isolation and genome sequencing of underexplored bacterial and archaeal … of the microbial product catalog : Beyond minimal draft and improved draft microbial genomes the program …

Breaking Bad, I guess. But no, you trained me in how to genome mine, so thank you for that. And you had to put up … And I think a lot of times, too, when we even look at publications, it’s always positive data, right? No one ever … BGCs but highly fragmented, in most of the metagenome sequences that we’ve already analyzed. But that’s a whole …

… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … And in DNA is all that the same molecule, just different sequences BEN: The other thing I think about JGI is, really, …

… research is focused on the discovery and characterization of novel bacterial, archaeal and eukaryotic microbes and … and biogeochemical cycles. Research Team    … A complete publication list available at Google Scholar. Schulz, C … (2022) Giant virus biology and diversity in the era of genome-resolved metagenomics. Nature Reviews Microbiology …

Mass spectrometry based metabolomics Below is a table of standard product offerings, including a description of … coverage of variants depends on project Fungal Minimal Draft Lower coverage short-read whole genome shotgun sequencing Assembly, annotation ( Mycocosm ) …

When submitting sequences to the JGI DNA Synthesis program, please include … add the characters “.gb” (no quotes, just .gb) to the end of your file name. …

The CSP New Investigator Call is for investigators and research … initiatives new to the JGI. Projects must be independent of ongoing JGI proposals, and lead PIs cannot have been lead … projects will provide pilot data to assess feasibility of a novel approach or form the foundation for a large-scale …