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… that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … (see Auspice Statement below) for the generation of sequence or metabolomic data, DNA synthesized, and any other … assembly, analysis, annotation, verification, creation of genome browsers, etc. The users, collaborators and JGI …

… “Adopt a Genome” is an informal program for faculty to “claim” the … faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This … genomes claimed (or about one per student) Seven student-drafted articles accepted with over 20 more in draft Efforts …

… driven prioritization lists for laboratory isolation and genome sequencing of underexplored bacterial and archaeal … of the microbial product catalog : Beyond minimal draft and improved draft microbial genomes the program … resequencing, RNA sequencing and epigenomics. Expansion of sequence space:  The JGI generates reference genomes from …

UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about natural … more than 50,000 genomes that we derived from meta-genome sequences. As always, you’ll find transcripts and show notes … and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, …

… sequencing products below. In addition, JGI will submit raw sequence data to  SRA at NCBI once the standard analysis is … coverage of variants depends on project Fungal Minimal Draft Lower coverage short-read whole genome shotgun sequencing Assembly, annotation ( Mycocosm ) …

The Joint Genome Institute's DNA Synthesis Platform capabilities support researchers exploring how to convert sequence into functional assessments. This is done by … automations for DNA design, assembly and analysis Overview of synthesis products The JGI DNA Synthesis platform enables …

… of their synthases so that we can start to use the DNA sequence to predict or just understand better the language … And it actually was jumping onto the I ntegrated Microbial Genomes and Metagenomes, the IMG platform that JGI has that … up on previous Natural Prodcast episodes  here . Show Notes Publication: Suo Z et al. A Mesorhizobium japonicum quorum …

The Metagenome Program uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work … comprising the largest public collection of plasmid sequences identified from genomes, SAGs, MAGs, metagenomes …

The JGI’s DNA Synthesis Program supports a wide range of projects, from single-gene synthesis to the synthesis of … Program aims to generate large datasets to explore sequence-function relationships, advancing the discovery of … the DOE's vision for a sustainable, bio-based economy. … Genome to Enzymes and Pathways focuses on discovering and …

… … Dan Udwary: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about natural … about the basics of genome mining, which is using DNA sequence to identify and interpret biosynthetic, secondary …