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… “Adopt a Genome” is an informal program for faculty to “claim” the … faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This opportunity, provided by the Joint Genome … necessary to extract meaningful biological insights from sequence data, employing IMG data and tools for comparative …

… analysis techniques to explore the vast and diverse world of microbes. Studying bacteria and archaea, including those … associated with microeukaryotes, enhances our understanding of terrestrial biogeochemical cycling and inter-organismal interactions. These insights are crucial for addressing key environmental …

… Research in the Woyke laboratory focuses on the utility of single-cell methods to access genetic material of uncultivated taxa of interest. One such … in the strongly biased representation of sequenced genomes in the public domain, the bulk of which belong to …

… well-integrated across JGI departments to ensure a robust offering of sequencing capabilities and products to our … through end-to-end automation — and further advancing sequence applications, single cell genomics, biodesign, and metabolomics capabilities.    …

… that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … (see Auspice Statement below) for the generation of sequence or metabolomic data, DNA synthesized, and any other … assembly, analysis, annotation, verification, creation of genome browsers, etc. The users, collaborators, and JGI …

… The Metagenome Program uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work … along with their associated viruses and mobile genetic elements. Beyond exploring and characterizing … The Metagenome Program focuses on the high-throughput sequencing of …

… research is focused on the discovery and characterization of novel bacterial, archaeal and eukaryotic microbes and viruses in environmental sequence data. We use multi-omics (metagenomics, metatranscriptomics, single cell genomics and phylogenomics) and machine learning to …

… Research in the Eloe-Fadrosh group focuses on using genome-resolved metagenomic approaches to identify and … develop computational approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial … on the assembly of metagenomic sequence data into microbial genomes, which is of fundamental value to improving our …

… Mass spectrometry based metabolomics Below is a table of standard product offerings, including a description of the product and … sequencing products below. In addition, JGI will submit raw sequence data to  SRA at NCBI once the standard analysis is … coverage of variants depends on project Fungal Minimal Draft Lower coverage short-read whole genome shotgun …

… UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about natural … more than 50,000 genomes that we derived from meta-genome sequences. As always, you’ll find transcripts and show notes … and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, …

… The Micro-Scale Applications group explores the genetic makeup of natural microbial communities using a variety of … technology in order to enhance the quality of single-cell genomes and directly link functional information with … The JGI uniquely offers the first quantitative Stable Isotope Probing (SIP) …