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The JGI has a strong interest in seeing that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … interpretation of sequence, metabolomics, and functional genomics data types as well as in advanced assembly and …

… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s … faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This … to: Build curiosity and illustrate the value of comparative genomic analysis Expose students to peer review process, …

DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s … and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … streams. This will all become clearer as we get into the genomics. So– ALISON TAKEMURA: I’m just enjoying the ride …

… in environmental sequence data. We use multi-omics (metagenomics, metatranscriptomics, single cell genomics and phylogenomics) and machine learning to identify new divergent lineages and expand the Tree of Life. We then … and biogeochemical cycles. Research Team    … A complete publication list available at Google Scholar. Schulz, C …

The JGI’s Microbial Program focuses on using cutting-edge sequencing, annotation and analysis … The program provides high-quality, large-scale genomic data to advance microbial research that drives … linking strain-level genetic variation to ecological niche adaptations.  Single cell sequencing approaches are also …

The IMG group owns and maintains integral components of JGI’s production workflow, … and is responsible for the annotation and analysis of (meta)genomic, (meta)transcriptomic, and functional genomic data … them to users via the Integrated Microbial Genomes & Microbiomes (IMG/M) system. Research Team    … The …

Biology is currently experiencing a revolution brought on by rapid developments in genomics and other omics technologies.  The exponential … Science 344(6186):909-13 … Research Efforts … Selected Publications … For further details, please reach out to the …

The Metagenome Program uses advanced sequencing technologies to decode the genomes of microbes in their … Metagenome Program combines large-scale, time-series metagenomic data with detailed characterization of model systems … of biogeochemically-relevant pathways, enabling modeling of microbiomes based on functional traits. These advancements …

Synthesis Program supports a wide range of projects, from single-gene synthesis to the synthesis of entire chromosomes, … The program has been a pioneering effort in functional genomics since 2012, with a focus on addressing critical … & Offerings … BOOST … Integrated Microbial Genomes and Microbiomes … Mycocosm … Phytozome … Inventory of Composable …

… by the Biological and Environmental Research program, the Joint Genome Institute provides advanced genomic capabilities, large-scale data and professional … Understand the assembly, function, and the behavior of microbiomes and manipulate them to facilitate microbial …