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The JGI has a strong interest in seeing that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … the first analysis of data produced at the facility, provided this is done in a timely fashion. The publications …

… … DAN UDWARY: You’re listening to the Department of Energy … of searching the internet, searching literature, and making databases. Because that’s what I noticed is really a … Usually, in a lot of cases, we still have to go through publications to get proteins, and their functions, and all …

The JGI has diverse capabilities in: DNA and RNA sequencing, Sample … Below is a table of standard product offerings, including a description of the product and deliverables as well as … DNA Synthesis Constructs <5kb in size Single gene or multiple small genes assembled to less than 5kb in length, …

With collaborative user projects, the JGI’s Plant Program delves into … regions of interest and gene copy number variation across multiple genomes. It provides the ability to discover syntenic orthologs, generate publication quality graphics and explore pangenome views of …

… … DAN UDWARY: You’re listening to the Department of Energy … him about more recent work like ActDES, which is a curated database of actinobacteria for evolutionary studies, and … of natural product biosynthesis in bacteria ” The ActDES publication came out after we talked. It looks like a great …

… “Adopt a Genome” is an informal program for faculty to … genomes, with the expectation that faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This …

Overview The JGI provides sequencing, synthesis, and targeted metabolomics support … research and sequence-based science.  Projects include de novo generation of genome data, assistance in interpreting …

The Facilities Integrating Collaborations for User Science … researchers to request the capabilities and expertise of multiple DOE National User Facilities in one research … provides customized analysis, the JGI also participates in publication of results. … Proposals for the annual FICUS …

… … Dan Udwary: You’re listening to the Department of Energy … efforts, like BiG-scape and BiG-SLiCE, and now the BiG-FAM database of biosynthetic gene cluster families. And he tells … encoded by them. Well, they had come out over actually multiple decades of time. But still to be able to use those …

… … DAN: Hey Marcy!  ALISON: Hey Marcy?  MARCY: Hello. How’s it … And we’ve done some work with those and have a couple of publications out there on the chemistry. There’s so much … garden ant as well as the American honeybee. And so I have multiple opinions which I’m never short of but. In terms of …