Complete genome sequence of Halorhabdus utahensis type strain (AX-2)

Published in:

Stand Genomic Sci 1(3) , 218-25 ( 2009)

Author(s):

Anderson, I., Tindall, B. J., Pomrenke, H., Goker, M., Lapidus, A., Nolan, M., Copeland, A., Glavina Del Rio, T., Chen, F., Tice, H., Cheng, J. F., Lucas, S., Chertkov, O., Bruce, D., Brettin, T., Detter, J. C., Han, C., Goodwin, L., Land, M., Hauser, L., Chang, Y. J., Jeffries, C. D., Pitluck, S., Pati, A., Mavromatis, K., Ivanova, N., Ovchinnikova, G., Chen, A., Palaniappan, K., Chain, P., Rohde, M., Bristow, J., Eisen, J. A., Markowitz, V., Hugenholtz, P., Kyrpides, N. C., Klenk, H. P.

DOI:

10.4056/sigs.31864

Abstract:

Halorhabdus utahensis Waino et al. 2000 is the type species of the genus, which is of phylogenetic interest because of its location on one of the deepest branches within the very extensive euryarchaeal family Halobacteriaceae. H. utahensis is a free-living, motile, rod shaped to pleomorphic, Gram-negative archaeon, which was originally isolated from a sediment sample collected from the southern arm of Great Salt Lake, Utah, USA. When grown on appropriate media, H. utahensis can form polyhydroxybutyrate (PHB). Here we describe the features of this organism, together with the complete genome sequence, and annotation. This is the first complete genome sequence of the a member of halobacterial genus Halorhabdus, and the 3,116,795 bp long single replicon genome with its 3027 protein-coding and 48 RNA genes is part of the Genomic Encyclopedia of Bacteria and Archaea project.

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