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… constraints exerted by viruses. Research in the viral genomics group aims at improving our collective understanding of ecological and evolutionary parameters driving virus:host dynamics in environmental microbial communities. This … ( Who is active when/where, and how? ). The JGI Viral Genomics group attempts to address this question in natural …

… Research in the Eloe-Fadrosh group focuses on using genome-resolved … communities and ecosystem function.  The Environmental Genomics group also hosts the Viral Genomics group . … on the assembly of metagenomic sequence data into microbial genomes, which is of fundamental value to improving our …

… recognized and credited for their work, while also adhering to the authorship policies of the journal in which the … that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … assembly, analysis, annotation, verification, creation of genome browsers, etc. The users, collaborators, and JGI …

… “Adopt a Genome” is an informal program for faculty to “claim” the … faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This … program is to: Build curiosity and illustrate the value of comparative genomic analysis Expose students to peer review …

… The Fungal & Algal Program explores the vast diversity of fungi and algae to unlock their potential for bioenergy, environmental sustainability, and bioproducts. By sequencing and analyzing the genomes of these organisms, the program investigates the … into bioenergy and bioproducts. The program’s fungal genomics research explores new metabolic processes and …

… bacterial, archaeal and eukaryotic microbes and viruses in environmental sequence data. We use multi-omics (metagenomics, metatranscriptomics, single cell genomics and phylogenomics) and machine learning to identify … discovering and characterizing giant viruses, which possess genomes and particle sizes that rival those of cellular …

… and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … streams. This will all become clearer as we get into the genomics. So– ALISON TAKEMURA: I’m just enjoying the ride … bacteria, because it is so easy to sequence their genomes comparatively to especially plants. So yeah, so from there, …

… The Metagenome Program uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work … detailed characterization of model systems to explore the dynamics of microbial ecosystems and their evolution. The … such as quantitative stable isotope probing (qSIP)-metagenomics and metatranscriptomics, to metagenomics and …

… Biology is currently experiencing a revolution brought on by rapid developments in genomics and other omics technologies.  The exponential … 2014), unearthing hundreds of thousands of new viral genomes and their predicted hosts (Nature 2016, Science … Other projects in the group include the sequencing and comparative analysis of thousands of archaeal and bacterial …

… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the … They’re at the base of the animal kingdom, in terms of evolution. Because they’re sitting there, they tend to have … pathways to each other. And so, that kind of group dynamic has changed this from a field where everyone’s …

… fantastic diversity of cell types and associated organisms, including fungal and bacterial symbionts, detrimental … pathogens, and associated viruses that all contribute to a dynamic ecosystem. We are interested in how plants … are influenced by microbial partners. We use a variety of genomics-powered tools to study this complexity, including …

… UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast– a podcast about natural … bright guy who’s been thinking for a long time about the evolution and natural products systems. This conversation … I think the important thing to remember is that, thanks to genomics, we now know that it is very hard to find stuff …