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… that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … experience and capabilities in the analysis, annotation, comparative analysis, and interpretation of sequence, metabolomics, and functional genomics data types as well as in advanced assembly and …

… faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This … program is to: Build curiosity and illustrate the value of comparative genomic analysis Expose students to peer review … with some of the latest developments in microbial genomics, metagenomics, and computational biology, and to …

The Metagenome Program uses advanced sequencing technologies to … such as quantitative stable isotope probing (qSIP)-metagenomics and metatranscriptomics, to metagenomics and … The JGI supports microbiome data science by enabling comparative genomics and metagenomics analysis through the …

Microbes drive critical ecosystem functions and affect global nutrient cycling, … constraints exerted by viruses. Research in the viral genomics group aims at improving our collective … abundant ocean viruses.  Nature . 537:689-93. … Selected Publications … For further information contact the Group …

… and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … streams. This will all become clearer as we get into the genomics. So– ALISON TAKEMURA: I’m just enjoying the ride … bacteria, because it is so easy to sequence their genomes comparatively to especially plants. So yeah, so from there, …

… a revolution brought on by rapid developments in genomics and other omics technologies.  The exponential … Other projects in the group include the sequencing and comparative analysis of thousands of archaeal and bacterial … Science 344(6186):909-13 … Research Efforts … Selected Publications … For further details, please reach out to the …

I think the important thing to remember is that, thanks to genomics, we now know that it is very hard to find stuff … of natural product biosynthesis in bacteria ” The ActDES publication came out after we talked. It looks like a great … genome mining software we mentioned: “ EvoMining reveals the origin and fate of natural product biosynthetic …

The JGI’s DNA Synthesis Program supports a wide range of projects, from … The program has been a pioneering effort in functional genomics since 2012, with a focus on addressing critical … … The IMG/M system serves as a community resource for comparative analysis and annotation of all publicly …

Plants are complex organisms that harbor a fantastic diversity … are influenced by microbial partners. We use a variety of genomics-powered tools to study this complexity, including … of plant/environmental responses … Selected Publications … Research Team Alumni … For further details, …

Research in the Eloe-Fadrosh group focuses on using … communities and ecosystem function.  The Environmental Genomics group also hosts the Viral Genomics group . … Microbiology , 15032. 10.1038/nmicrobiol.2015.32 … Selected Publications … For further details, please reach out to the …