Search

… that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … experience and capabilities in the analysis, annotation, comparative analysis, and interpretation of sequence, metabolomics, and functional genomics data types as well as in advanced assembly and …

… faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This … program is to: Build curiosity and illustrate the value of comparative genomic analysis Expose students to peer review … with some of the latest developments in microbial genomics, metagenomics, and computational biology, and to …

… and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … streams. This will all become clearer as we get into the genomics. So– ALISON TAKEMURA: I’m just enjoying the ride … bacteria, because it is so easy to sequence their genomes comparatively to especially plants. So yeah, so from there, …

The Fungal & Algal Program explores the vast diversity of fungi and algae to unlock their potential for bioenergy, … into bioenergy and bioproducts. The program’s fungal genomics research explores new metabolic processes and … provides data access, visualization, and analysis tools for comparative genomics of fungi. Mycocosm enables users to …

… … Dan Udwary: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about natural products and the … of hooks into IMG’s data. IMG being Integrated Microbial Genomics at JGI, a large data set of bacterial genomes. And …

Secondary Metabolites Program focuses on the exploration of secondary metabolites across bacteria, fungi, algae and … The Secondary Metabolites Program offers users extensive genomics, DNA synthesis and metabolomics capabilities to … sustainable agriculture, and other fields reliant on natural product chemistry. These efforts will contribute to …

The  Open Green Genomes (OGG) project seeks to develop comparative high quality genomes and annotations across the … on Phytozome … Phytozome is the JGI's Plant Comparative Genomics portal. Families of related genes representing the … the ability to discover syntenic orthologs, generate publication quality graphics and explore pangenome views of …

… … DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast– a … I think the important thing to remember is that, thanks to genomics, we now know that it is very hard to find stuff … of natural product biosynthesis in bacteria ” The ActDES publication came out after we talked. It looks like a great …

… … DAN: Hey, everybody. Welcome back for another episode of Natural Prodcast. Right now I’m working on this the … up on previous Natural Prodcast episodes  here . Show Notes Publication: Suo Z et al. A Mesorhizobium japonicum quorum …

… uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work … such as quantitative stable isotope probing (qSIP)-metagenomics and metatranscriptomics, to metagenomics and … The JGI supports microbiome data science by enabling comparative genomics and metagenomics analysis through the …

… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the science and … on DNA sequencing and synthetic biology. But also the metagenomics and gut microbiome, as I think that it’s like a …