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Publication Policy
… that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … experience and capabilities in the analysis, annotation, comparative analysis, and interpretation of sequence, metabolomics, and functional genomics data types as well as in advanced assembly and …
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Partnerships: Adopt-A-Genome
… faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This … program is to: Build curiosity and illustrate the value of comparative genomic analysis Expose students to peer review … with some of the latest developments in microbial genomics, metagenomics, and computational biology, and to …
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DNA Synthesis Program
… a wide range of projects, from single-gene synthesis to the synthesis of entire chromosomes, advancing the … The program has been a pioneering effort in functional genomics since 2012, with a focus on addressing critical … … The IMG/M system serves as a community resource for comparative analysis and annotation of all publicly …
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Analyze Data
Chief Informatics Officer …
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Publications
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Partnerships Development Team
Developed in 2017, the PDT was established in part to help … who haven't yet partnered with the JGI. The Business Development Team works closely with the Berkeley Lab …
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Metagenome Program
… such as quantitative stable isotope probing (qSIP)-metagenomics and metatranscriptomics, to metagenomics and metabolomics data, … The JGI supports microbiome data science by enabling comparative genomics and metagenomics analysis through the …
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Comparative Genomics and Transcriptomics to Analyze Fruiting Body Development in Filamentous Ascomycetes
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Plant-Microbial Interactions Group
… are influenced by microbial partners. We use a variety of genomics-powered tools to study this complexity, including single-cell and spatial transcriptomics barcode-based genetics (RB-TnSeq), and … of plant/environmental responses … Selected Publications … Research Team Alumni … For further details, …
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Metabolomics Program
The JGI’s Metabolomics Program works to uncover the roles of small molecules in biological … and ecosystems at the molecular level. Integrating genomics with metabolomics fuels the discovery  of novel … Combining collected metabolomics data with genomics, transcriptomics, imaging, and other data from EcoFAB systems …
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Natural Prodcast Episode 10: A Primer on Genome Mining
… and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … streams. This will all become clearer as we get into the genomics. So– ALISON TAKEMURA: I’m just enjoying the ride … bacteria, because it is so easy to sequence their genomes comparatively to especially plants. So yeah, so from there, …
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Workforce Development & Education Outreach
The JGI aims to inspire more students to enter the STEM workforce by fostering an understanding of our role in advancing the energy and environmental genomics research frontier.  Learn more about the JGI's …
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