Search

… faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This … program is to: Build curiosity and illustrate the value of comparative genomic analysis Expose students to peer review process, … from sequence data, employing IMG data and tools for comparative analysis, visualization and interpretation using …

… cycling and inter-organismal interactions. These insights are crucial for addressing key environmental … The program provides high-quality, large-scale genomic data to advance microbial research that drives … management. The program aims to generate high-quality genomic datasets, particularly for uncultivated …

… The Metagenome Program uses advanced sequencing technologies to … that govern ecosystem processes. This research provides insights into microbial diversity and metabolic potential, with … Metagenome Program combines large-scale, time-series metagenomic data with detailed characterization of model systems …

… Research in the Eloe-Fadrosh group focuses on using genome-resolved metagenomic approaches to identify and characterize genomic information from uncultivated microbes and viruses. … Our research focuses on the assembly of metagenomic sequence data into microbial genomes, which is of …

… that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to produce manuscripts for publication and the responsibility for leading the efforts … assembly, analysis, annotation, verification, creation of genome browsers, etc. The users, collaborators, and JGI …

… of small molecules in biological systems, linking them with genomic data to enhance our understanding of genome science, … advanced mass spectrometry techniques and computational tools, the program supports foundational research related to … microbes, and understanding microbiome interactions. The  insights derived are crucial for advancing the bioeconomy, …

… and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … streams. This will all become clearer as we get into the genomics. So– ALISON TAKEMURA: I’m just enjoying the ride … bacteria, because it is so easy to sequence their genomes comparatively to especially plants. So yeah, so from there, …

… The program has been a pioneering effort in functional genomics since 2012, with a focus on addressing critical … Program plays a central role in advancing functional genomics, focusing on developing genetic systems that can … innovative screening technologies and computational tools that enhance biofuel production and biosystem design. …

… and bioproducts. By sequencing and analyzing the genomes of these organisms, the program investigates the … and biogeochemistry. This research helps translate their genomic potential into practical applications, including sustainable biofuels, … harnesses cutting-edge sequencing technologies and advanced genomic analysis to explore the rich diversity of fungi and …

… to leverage our data to develop new algorithms, models and tools in support of DOE mission priorities. Data … Download plant, algal, fungal and microbial genomes and metagenomes — top-quality genomic data, open to all researchers. Book a session via … for comprehensive access to information regarding genome and metagenome sequencing projects, and their …

… in environmental sequence data. We use multi-omics (metagenomics, metatranscriptomics, single cell genomics and phylogenomics) and machine learning to identify new divergent … traditional boundaries between viruses and cellular life, providing unique insights into viral evolution and …

… constraints exerted by viruses. Research in the viral genomics group aims at improving our collective … ecosystem-level impacts of viral infections. The Viral Genomics Group is hosted within the Environmental Genomics group . Research Team … ( Who is active when/where, and how? ). The JGI Viral Genomics group attempts to address this question in natural …