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… that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … experience and capabilities in the analysis, annotation, comparative analysis, and interpretation of sequence, metabolomics, and functional genomics data types as well as in advanced assembly and …

… faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This … program is to: Build curiosity and illustrate the value of comparative genomic analysis Expose students to peer review process, …

The program provides high-quality, large-scale genomic data to advance microbial research that drives … … The IMG/M system serves as a community resource for comparative analysis and annotation of all publicly … available genomes from three domains of life. It provides tools for analyzing the functional capability of microbial …

Metagenome Program combines large-scale, time-series metagenomic data with detailed characterization of model systems … evolution. The Program focuses on developing computational tools and visualization resources that support user analysis … The JGI supports microbiome data science by enabling comparative genomics and metagenomics analysis through the …

… of small molecules in biological systems, linking them with genomic data to enhance our understanding of genome science, … advanced mass spectrometry techniques and computational tools, the program supports foundational research related to … are able to link metabolic activity with gene expression, providing deeper insights into functional genomics. A key …

… and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … streams. This will all become clearer as we get into the genomics. So– ALISON TAKEMURA: I’m just enjoying the ride … bacteria, because it is so easy to sequence their genomes comparatively to especially plants. So yeah, so from there, …

The program has been a pioneering effort in functional genomics since 2012, with a focus on addressing critical … innovative screening technologies and computational tools that enhance biofuel production and biosystem design. … … The IMG/M system serves as a community resource for comparative analysis and annotation of all publicly …

… and biogeochemistry. This research helps translate their genomic potential into practical applications, including … fungal and algal pangenomes, and integrate multi-omics tools to enhance functional studies. These efforts seek to … provides data access, visualization, and analysis tools for comparative genomics of fungi. Mycocosm enables users to …

… and anti-pest compounds.  The program is working to expand genomic resources for key plant species, enhancing our … The  Open Green Genomes (OGG) project seeks to develop comparative high quality genomes and annotations across the … the ability to discover syntenic orthologs, generate publication quality graphics and explore pangenome views of …

… last decade or so. He’s involved with a lot of the common tools that genome miners use, including antiSMASH, MIBiG, … over the last few years I think you’ve delved more into providing data to whoever. And so I wanted to first talk … of hooks into IMG’s data. IMG being Integrated Microbial Genomics at JGI, a large data set of bacterial genomes. And …

… fungal and microbial genomes and metagenomes — top-quality genomic data, open to all researchers. … The JGI Genome … unified access to all JGI genomic databases and analytical tools for all JGI sequencing projects. In 2021, the JGI … … The IMG/M system serves as a community resource for comparative analysis and annotation of all publicly …