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… that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … (see Auspice Statement below) for the generation of sequence or metabolomic data, DNA synthesized, and any other … Science Program lead(s) to discuss authorship at any point. Specifically, Users are encouraged to discuss authorship …

… Undergraduate Research Experience (CURE) that consists of coordinated hands-on experiments across fungal biology … resources empower students through isolation and genome sequencing of new fungal species.  Students collect fungi, sterilize tissue, isolate genes and more. The metadata then goes into …

… faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This opportunity, provided by the Joint Genome … necessary to extract meaningful biological insights from sequence data, employing IMG data and tools for comparative …

… any work can begin, including the submission of samples for sequencing, or the submission of sequencing data for … and Appendix. An Appendix identifies the type of work or specific proposal to be covered under the Agreement. The … rights in technical data, project reporting to the DOE, and publication requirements. An official with authority is …

… The JGI’s Microbial Program focuses on using cutting-edge sequencing, annotation and analysis techniques to explore the vast and diverse world of microbes. Studying bacteria and archaea, including those … challenges, such as improving soil health, carbon sequestration and bioeconomy applications. The program …

… group aims at improving our collective understanding of ecological and evolutionary parameters driving virus:host … involves both experimental and computational exploration of uncultivated viral diversity, characterization of molecular mechanisms involved in virus:host interaction …

… research is focused on the discovery and characterization of novel bacterial, archaeal and eukaryotic microbes and viruses in environmental sequence data. We use multi-omics (metagenomics, … to identify new divergent lineages and expand the Tree of Life. We then investigate the coding potential to find …

… The Metagenome Program uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work … uses several experimental approaches to assess microbial activity across ecosystems.  By studying microbial … The Metagenome Program focuses on the high-throughput sequencing of microbial communities to uncover the complex …

… Below is a brief description of the process needed to prepare and ship samples for sequencing by the JGI.  Additionally it includes … sample QC requirements and protocols Obtaining DNA and RNA of suitable quantity and quality has been the rate-limiting … material is one of the greatest predictors of a successful sequencing project. It is imperative that users properly …

… more than 50,000 genomes that we derived from meta-genome sequences. As always, you’ll find transcripts and show notes … and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … of a polyketide synthase. Each domain catalyzes some specific reaction. And so I would take a collection of …

… You can visit the Products & Offerings section of our website for more details, including a downloadable pdf of products categorized by Science Program.  … The majority of JGI projects come from the user community. Find out about … proposal calls and proposal submission, as well as examples of approved proposals, please visit the Proposals FAQ .  …