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Publication Policy
The JGI has a strong interest in seeing that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … (see Auspice Statement below) for the generation of sequence or metabolomic data, DNA synthesized, and any …
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Viral Genomics Group
… group aims at improving our collective understanding of ecological and evolutionary parameters driving virus:host … computational exploration of uncultivated viral diversity, characterization of molecular mechanisms involved in … abundant ocean viruses.  Nature . 537:689-93. … Selected Publications … For further information contact the Group …
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Partnerships: Adopt-A-Genome
… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s … faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This opportunity, provided …
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Publications
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Metagenome Program
… uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work … and virus-microbe interactions, over ecological and evolutionary time scales.The Metagenome Program combines … large-scale, time-series metagenomic data with detailed characterization of model systems to explore the dynamics of …
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Natural Prodcast Episode 13: Francisco Barona Goméz
… … DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast– a … ActDES, which is a curated database of actinobacteria for evolutionary studies, and hopefully we can catch him again … of natural product biosynthesis in bacteria ” The ActDES publication came out after we talked. It looks like a great …
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Natural Prodcast Episode 10: A Primer on Genome Mining
DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … ALISON TAKEMURA: Hmm. Well, I think, I mean from an evolutionary perspective, I would think that genes that are …
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Microbial Program
… analysis techniques to explore the vast and diverse world of microbes. Studying bacteria and archaea, including those … analysis of such datasets. The program also collaborates with isolate collections to complete large-scale … families, and pathways, enhancing our understanding of evolutionary diversification and microbial diversity. Learn …
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Secondary Metabolites Program
Secondary Metabolites Program focuses on the exploration of secondary metabolites across bacteria, fungi, algae and … of secondary metabolites and improving the tools for their characterization, the program strives to facilitate the … that alleviate the constraints of cells and allow for substrates to be directed towards secondary metabolite synthesis. …
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Natural Prodcast Episode 23: Aaron Puri
… … DAN: Hey, everybody. Welcome back for another episode of Natural Prodcast. Right now I’m working on this the … which are also known to be symbionts of things like invertebrates like mussels. DAN: Oh, OK. Cool. Very cool. JACKIE: … up on previous Natural Prodcast episodes  here . Show Notes Publication: Suo Z et al. A Mesorhizobium japonicum quorum …
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New Lineages of Life Group
Our research is focused on the discovery and characterization of novel bacterial, archaeal and eukaryotic microbes and … and biogeochemical cycles. Research Team    … A complete publication list available at Google Scholar. Schulz, C …
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Fungal & Algal Program
The Fungal & Algal Program explores the vast diversity of fungi and algae to unlock their potential for bioenergy, environmental sustainability, and bioproducts. By sequencing and analyzing the genomes of these organisms, the program investigates the …
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