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The JGI has a strong interest in seeing that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … and any other contributions, such as assembly, analysis, annotation, verification, creation of genome browsers, …

DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s … and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … The sequence tells you a lot, but it doesn’t tell you nearly everything. What I think a lot of people hope for is …

… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … open up our field to other study. And so it was kind of an early example, to try to open that microbiome field. In the … you’d like to read more about this, I highly recommend his publication last year, “The Biosynthetic Diversity of the …

… for another episode of Natural Prodcast. Right now I’m working on this the afternoon of the day I’m due to release it, … biosynthetic gene clusters in your organism that you love dearly and can genetically manipulate. And yeah. And so … up on previous Natural Prodcast episodes  here . Show Notes Publication: Suo Z et al. A Mesorhizobium japonicum quorum …

The Fungal & Algal Program explores the vast diversity of fungi and algae to unlock their potential for bioenergy, environmental sustainability, and bioproducts. By sequencing and analyzing the genomes of these organisms, the program investigates the biological mechanisms …

… … DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s … to a particular producing organism in the context of a clearly defined ecological interaction. So it’s not central … of natural product biosynthesis in bacteria ” The ActDES publication came out after we talked. It looks like a great …

… is Professor Cassandra Quave from Emory University, with joint appointments in the School of Medicine and College of … a lot of ground – her book, bioprospecting vs biopiracy, early stage drug discovery in general, and a possible … I think on COVID that we’re getting ready to submit for publication and have found some interesting hits for that as …

… of natural products, Professor Bill Fenical from Scripps Institution of Oceanography in San Diego. Bill is a pioneer … us that we want to talk a little bit about. It’s sort of early stages. But I think that is emblematic of some of the … from the ocean. We didn’t know whether to study bacteria, fungi, archaea, the whole range of microbial life. So, we …

… … DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s … We had Brad on and he kind of waxed poetic about the early parts of the project. How did that postdoc where– I … Usually, in a lot of cases, we still have to go through publications to get proteins, and their functions, and all …

… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … natural chemical compounds that you find in plants, fungi and bacteria, basically all living things. When your … metabolism and secondary metabolism, and we talk about the early history of the field. Then, in the third episode, …

… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … the science of natural products, and we dive into the very early history of the field. If you continue on, in the next … bacterial sacred metabolite, and ergot alkaloids come from fungi, and Taxol from plants. Plants, fungi, bacteria, …