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The JGI has a strong interest in seeing that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to produce manuscripts for publication and the responsibility for leading the efforts …

… collaborative user projects, the JGI’s Plant Program delves into the natural world’s potential to address global … will accelerate gene discovery. BrachyPan on Phytozome (see Brachypodium Resources below) PennyPan on Phytozome … the ability to discover syntenic orthologs, generate publication quality graphics and explore pangenome views of …

… starts with a User Agreement — before any work can begin, including the submission of samples for sequencing, or … must have the legal authority to commit your institution or organization to the terms and conditions in the User … rights in technical data, project reporting to the DOE, and publication requirements. An official with authority is …

… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s … faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This … Microbiol Resour Announc.  … Objectives … What is IMG/M … Publications … Access to the microbial genomes and …

… fantastic diversity of cell types and associated organisms, including fungal and bacterial symbionts, detrimental … single-cell atlas comprising Sorghum, Switchgrass, and Brachypodium datasets. We recently profiled the association … of plant/environmental responses … Selected Publications … Research Team Alumni … For further details, …

… by the Biological and Environmental Research program, the Joint Genome Institute provides advanced genomic capabilities, … expertise to support the global research community in studies of complex biological and environmental systems. …

Brachypodium model system traces polyploid genome evolution. Flowering plants abide by the concept, “the more the merrier,” … of the genomes from the diploids  B. stacei and  B. distachyon , a relative of the candidate bioenergy crop …

DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s … and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … genome mining over the years, and we talk about a new publication out of JGI in Nature Biotechnology , for which …

… bacterial, archaeal and eukaryotic microbes and viruses in environmental sequence data. We use multi-omics … and biogeochemical cycles. Research Team    … A complete publication list available at Google Scholar. Schulz, C … nucleus of amoebae. The ISME Journal. 8 (8), 1634-1644 … Publications … For further details, please reach out to the …

Dr. Vogel joined JGI in 2014 to establish a plant functional genomics … and utilizing these resources to understand genome organization and regulation, abiotic stress tolerance, and … Visiting Fellowship Australia … Education … Selected Publications … Awards and Service …