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… recognized and credited for their work, while also adhering to the authorship policies of the journal in which the … that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to produce manuscripts for publication and the responsibility for leading the efforts …

… collaborative user projects, the JGI’s Plant Program delves into the natural world’s potential to address global challenges by exploring plants’ role in capturing carbon, detoxifying soils, interacting with … The Plant Program advances our understanding of plants’ biological and ecological roles to foster …

… starts with a User Agreement — before any work can begin, including the submission of samples for sequencing, or … must have the legal authority to commit your institution or organization to the terms and conditions in the User … rights in technical data, project reporting to the DOE, and publication requirements. An official with authority is …

… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s … the expectation that faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This … A primary purpose of this project is to bring educators from a broad range of disciplines up-to-speed …

… fantastic diversity of cell types and associated organisms, including fungal and bacterial symbionts, detrimental microbial … viruses that all contribute to a dynamic ecosystem. We are interested in how plants self-organize, influence, and are … Plant microbiomes hold the amazing ability to influence plant development, fitness and …

… bacterial, archaeal and eukaryotic microbes and viruses in environmental sequence data. We use multi-omics (metagenomics, metatranscriptomics, single cell genomics and phylogenomics) and machine learning to identify new divergent lineages and expand … Exploring the fascinating world of giant viruses, which challenge …

… Brachypodium model system traces polyploid genome evolution. Flowering plants abide by the concept, “the more the merrier,” … of the genomes from the diploids  B. stacei and  B. distachyon , a relative of the candidate bioenergy crop … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …

… DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about … and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … genome mining over the years, and we talk about a new publication out of JGI in Nature Biotechnology , for which …

… Dr. Vogel joined JGI in 2014 to establish a plant functional genomics … genomic resources that fostered the widespread adoption of Brachypodium distachyon as an experimental model for the … and utilizing these resources to understand genome organization and regulation, abiotic stress tolerance, and …

… the process needed to prepare and ship samples for sequencing by the JGI.  Additionally it includes instructions on accessing sample-level reports and tracking … 1) Review JGI sample QC requirements and protocols Obtaining DNA and RNA of suitable quantity and quality has been …