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… ensure that all contributors to a research project are appropriately recognized and credited for their work, while also adhering to the … that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … ORCiD and relevant CRediT taxonomy categories. Users: Users are responsible for reviewing the journal's authorship …

… The Fungal & Algal Program explores the vast diversity of fungi and algae to unlock their potential for bioenergy, … advanced genomic analysis to explore the rich diversity of fungi and algae. These organisms play a critical role in … environmental sustainability. Fungi, with million species, are essential for ecosystem functioning — particularly in …

… the exploration of secondary metabolites across bacteria, fungi, algae and plants. These molecules, which are not essential for fundamental growth, provide critical … reservoir of secondary metabolites produced by bacteria, fungi, algae and plants. These compounds are key to …

… The JGI has diverse capabilities in: DNA and RNA sequencing, Sample and library preparation, … Mass spectrometry based metabolomics Below is a table of standard product offerings, including a description of … is submitted to the  MassIVE repository . Not all products are available for all proposal calls.   Please review the …

… DAN: You’re listening to the US Department of Energy Joint … product families we talk a lot about in this interview are the RiPPs, which stands for “Ribosomally synthesized and … marine organisms. Except during the time that we worked in fungi. But what do you see as the overall theme of your …

… and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … in the earlier primers. In bacteria, at least, and in most fungi, biosynthetic gene clusters, which are the genes that … some marine. There’s some soil samples. There’s human gut samples. There’s lots and lots of– animal associated, …

… So it was great to hear her passion and enthusiasm for fungi. And we talk a lot about some of the technical … from the University of Wisconsin. I wanted to say that you are the first person we’ve had on to talk about fungal … they only talk about the bacteria. My god! 30% of our gut microbes are fungi. It’s really frustrating to me. Maybe …

… Usually, in a lot of cases, we still have to go through publications to get proteins, and their functions, and all … talked about at the JGI meeting. DAN UDWARY: What’s your gut feeling about that sampling? Do you find different … of the soil, because there’s no secondary metabolites from anaerobic bacteria– something we know now is actually not …

… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s … faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This opportunity, provided … purpose of this project is to bring educators from a broad range of disciplines up-to-speed with some of the latest …

… bacteria so what’s – I guess that maybe you could say the gut is, kind of. But not the same way this is designed … And we’ve done some work with those and have a couple of publications out there on the chemistry. There’s so much … working on that aspect and it’s quite active against some fungi. But we’re also really interested in distribution. So …

… is a “fireside chat”-style podcast about natural products and the science and scientists of secondary metabolism. Natural products, secondary … make species unique and different from one another. They are incredibly important to medicine, the environment, and …

… in Berkeley. I’m not in Paris.  ALISON: Oh my god. Where are we? I know, I know. I know.  DAN: You know where you … and synthetic biology. But also the metagenomics and gut microbiome, as I think that it’s like a perfect storm in … penicillin from the fungal species – probably told us that fungi could be very productive sources for, say, biological …