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JGI has a strong interest in seeing that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … (see Auspice Statement below) for the generation of sequence or metabolomic data, DNA synthesized, and any …

… about methane gas. And oftentimes people’s mind go right to anaerobic ecosystems. But these are actually– so methane– biologically produced methane is produced from degradation of carbon in the absence of oxygen. But these … up on previous Natural Prodcast episodes  here . Show Notes Publication: Suo Z et al. A Mesorhizobium japonicum quorum …

… faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This opportunity, provided by the Department of Energy Joint Genome Institute, builds …

The focus of this group, in recent years, has been to bring generalizable technologies to bacteria, yeasts and algae previously with little to no genetic tools … expression and functional exploration.  The developed strains represent an additional phase of user-accessible …

… and other omics technologies.  The exponential growth of DNA sequencing data, coupled with recent computational … and uncultured DNA Viruses and retroviruses.  Nucleic Acids Res.  45(D1):D457-D465. Paez-Espino, D. et al. (2016) … Science 344(6186):909-13 … Research Efforts … Selected Publications … For further details, please reach out to the …

… convert sequence into functional assessments. This is done by synthesizing genes, pathways, and whole chromosomes for bioenergy, nutrient cycling and … automations for DNA design, assembly and analysis Overview of synthesis products The JGI DNA Synthesis platform enables …

The Fungal & Algal Program explores the vast diversity of fungi and algae to unlock their potential for bioenergy, environmental sustainability, and bioproducts. By sequencing and analyzing the genomes of these organisms, … fungi and algae to play a vital role in carbon cycling, biodegradation and biogeochemistry. This research helps …

… — before any work can begin, including the submission of samples for sequencing, or the submission of sequencing data for synthesis. This agreement, required by the DOE for all work performed in its User Facilities, is … rights in technical data, project reporting to the DOE, and publication requirements. An official with authority is …

Microbial Program focuses on using cutting-edge sequencing, annotation and analysis techniques to explore the vast and diverse world of microbes. Studying bacteria and archaea, including those … datasets, particularly for uncultivated microorganisms, by sequencing large populations of bacteria and archaea in …

DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … enzyme systems that really just exist to pull an amino acid out of solution and stick another amino acid or …