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Publication Policy
… to a research project are appropriately recognized and credited for their work, while also adhering to the authorship … that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … JGI staff will provide Users with a list of contributors and their corresponding ORCiD and relevant CRediT taxonomy …
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New Lineages of Life Group
… Our research is focused on the discovery and characterization of novel bacterial, archaeal and eukaryotic microbes and viruses in environmental sequence data. We use multi-omics … Exploring the fascinating world of giant viruses, which challenge our understanding of viral …
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Sequencing Technologies & Products
…   Our Sequencing Technologies Group is well-integrated across JGI departments to ensure a robust offering of sequencing capabilities and products to our users. This includes scaling the … An assay used for profiling transcription factor binding … been further scaled to a multiplexed DAP-seq (multiDAP-seq) method allowing high-throughput processing of samples in …
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Publications
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Micro-Scale Applications Group
… the genetic makeup of natural microbial communities using a variety of cutting-edge approaches.  Our group also … microfluidics/microdroplet technology in order to enhance the quality of single-cell genomes and directly link functional information with individual cells. Research Team    …
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Partnerships: Adopt-A-Genome
… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s unpublished … faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This … purpose of this project is to bring educators from a broad range of disciplines up-to-speed with some of the latest …
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FICUS
… The Facilities Integrating Collaborations for User Science (FICUS) call represents a unique … opportunity for researchers to request the capabilities and expertise of multiple DOE National User Facilities in … provides customized analysis, the JGI also participates in publication of results. …
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Microbiome Data Science Team
… Biology is currently experiencing a revolution brought on by rapid developments in genomics and other omics technologies.  The exponential growth of DNA … analysis and interpretation is creating new opportunities for breakthrough discoveries and catalyzing a major …
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Environmental Genomics Group
… Research in the Eloe-Fadrosh group focuses on using genome-resolved metagenomic approaches to identify and characterize genomic information from uncultivated microbes and viruses. We develop … which is of fundamental value to improving our understanding of microbial ecology and metabolism by elucidating …
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Plant Program
… With collaborative user projects, the JGI’s Plant Program delves into the natural world’s potential to address global … to environmental changes. The program lays the groundwork for sustainable solutions to current problems facing … The Plant Program advances our understanding of plants’ biological …
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Secondary Metabolites Program
… of secondary metabolites across bacteria, fungi, algae and plants. These molecules, which are not essential for fundamental growth, provide critical advantages to the organisms producing them, and are often involved in defense, nutrient … The Secondary Metabolites Program targets the vast and underexplored reservoir of secondary metabolites …
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Microbial Program
… The JGI’s Microbial Program focuses on using cutting-edge sequencing, annotation and analysis techniques to explore the vast and … inter-organismal interactions. These insights are crucial for addressing key environmental challenges, such as … The Microbial Program focuses on using advanced sequencing technologies to explore microbial diversity …
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