Search

… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s … faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This … genomes claimed (or about one per student) Seven student-drafted articles accepted with over 20 more in draft Efforts …

… that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to produce manuscripts for … assembly, analysis, annotation, verification, creation of genome browsers, etc. The users, collaborators and JGI …

The JGI has diverse capabilities in: DNA and RNA sequencing, Sample and library preparation, DNA … finished product depend on genome. Selected genomes will be improved based on feasibility and scientific merit Assembly, … ( IMG ) 280/298 Microbial Improved Draft, Isolate High quality draft assembly of long-read sequence data, …

Microbial Program focuses on using cutting-edge sequencing, annotation and analysis techniques to explore the vast and … and bioeconomy applications. The program provides high-quality, large-scale genomic data to advance microbial … of the microbial product catalog : Beyond minimal draft and improved draft microbial genomes the program offers …

… is a brief description of the process needed to prepare and ship samples for sequencing by the JGI.  Additionally it … protocols Obtaining DNA and RNA of suitable quantity and quality has been the rate-limiting step for many projects at … collection and storage (from PacBio) Best practices for High Molecular Weight DNA extraction and quality control …

The Joint Genome Institute's DNA Synthesis Platform capabilities … assessments. This is done by synthesizing genes, pathways, and whole chromosomes for bioenergy, nutrient cycling and … group dedicated to user project design, assembly, and quality control Strain Engineering Group : a research & …

DAN UDWARY: You’re listening to the Department of Energy … and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … but in subtle ways that affect fitness. And so, doing a high level kind of analysis, you just might not be able to …

Group applies cutting edge molecular capabilities and state-of-the-art next-generation sequencing to enable biological … lowering costs. Staff process samples, perform quality checks, and prep libraries for sequencing. They …

… pioneering functional genomics to solve the most relevant bioenergy and environmental problems.  The mission of … scientific discovery at the DOE Office of Science through high performance computing (HPC) and data analysis.  The DOE … more customized analysis, the JGI also participates in publication of results. … Submission … More on Sequencing …

Overview The JGI provides sequencing, synthesis, and targeted metabolomics support for DOE-BER funded awards, … will develop fuels and products by integrating three highly interconnected DOE priority areas of Feedstock … science.  Projects include de novo generation of genome data, assistance in interpreting and/or building on …