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Publication Policy
The JGI has a strong interest in seeing that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … work in a way that goes beyond the deliverables for JGI standard products   and/or make substantial intellectual …
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Synthetic Biology Lab
The Synthetic Biology lab is divided into a DNA synthesis production group … technologies to the broader community.  We focus our efforts on integrating database mining and sequence design …
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Synthetic Biology Informatics Group
Software engineers in the Synthetic Biology Informatics Group develop, deploy, and maintain …
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Synthesis
The Joint Genome Institute's DNA Synthesis Platform capabilities support researchers exploring how to … Group : a team that develops data science tools for workflow management and novel automations for DNA design, …
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DNA Synthesis Program
The JGI’s DNA Synthesis Program supports a wide range of projects, from … bioenergy solutions.  The program has been a pioneering effort in functional genomics since 2012, with a focus on … design-build transition in synthetic biology engineering workflows. … The IMG/M system serves as a community resource …
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Publications
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FICUS
The Facilities Integrating Collaborations for User Science … completed on an accelerated timeline as compared with the standard CSP projects. In addition, they must utilize a … provides customized analysis, the JGI also participates in publication of results. … Proposals for the annual FICUS …
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Partnerships: Adopt-A-Genome
… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s unpublished … faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This … in microbial genomics, metagenomics, and computational biology, and to empower them with the knowledge and skills …
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Products
The JGI has diverse capabilities in: DNA and RNA sequencing, Sample … Mass spectrometry based metabolomics Below is a table of standard product offerings, including a description of the … to completion of standard analysis.  Raw data is provided for all sequencing products below. In addition, JGI will …
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IMG Group
The IMG group owns and maintains integral components of JGI’s production workflow, and is responsible for the annotation and analysis of (meta)genomic, …
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Partnerships: Myco-Ed
The Mycological Curriculum for Education and Discovery  (Myco-Ed) is a Course-Based … bioinformatics apps and compute resources to power their workflows. The reproducible and customizable workflows are …
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Institutional User Agreements
Every approved proposal starts with a User Agreement — before any … rights in technical data, project reporting to the DOE, and publication requirements. An official with authority is … the Contracts Officer will notify all that work may begin. Standard practice requires completion of work on all …
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