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… Research in the Woyke laboratory focuses on the utility of single-cell methods to access genetic material of uncultivated taxa … Phylogenetic diversity estimates show that the gap between cultivated and uncultivated … of which belong to only three phyla. The Woyke group uses single-cell sequencing as a means to begin filling this gap. …

…   Our Sequencing Technologies Group is well-integrated across JGI departments to ensure a robust offering of … automation — and further advancing sequence applications, single cell genomics, DNA synthesis, and metabolomics … An assay used for profiling transcription factor binding …

… The purpose of this policy is to establish communication norms around JGI contributions, ensure … that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … assembly, analysis, annotation, verification, creation of genome browsers, etc. The users, collaborators, and JGI …

… Our research is focused on the discovery and characterization of … We use multi-omics (metagenomics, metatranscriptomics, single cell genomics and phylogenomics) and machine learning to … Exploring the fascinating world of giant viruses, which challenge our … possess genomes and particle sizes that rival those of cellular organisms. Giant viruses challenge the traditional …

… DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about natural … and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … Episode Transcript …

… The JGI’s Microbial Program focuses on using cutting-edge sequencing, annotation and analysis … to explore the vast and diverse world of microbes. Studying bacteria and archaea, including those associated … The Microbial Program focuses on using advanced sequencing technologies …

… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s unpublished microbial genomes, with the expectation that faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This … A primary purpose of this project is to bring educators from …

… Research in the Eloe-Fadrosh group focuses on using genome-resolved metagenomic approaches to identify … Our research focuses on the assembly of metagenomic sequence data into microbial genomes, which is of fundamental value to improving our … qSIP quantifies incorporation of isotopes from labeled nutrients …

… The Metagenome Program uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work encompasses bacteria, archaea, and … to assess microbial activity across ecosystems.  By studying microbial communities and their interactions, the …

… DAN: You’re listening to the US Department of Energy Joint … is always associated with toxicity, basically, killing cells. ALISON: Right, because they’re so reactive. BEN: … DAN: Yeah, I don’t think your lab is gonna tackle that single handedly, right? So, yeah, getting the community …

… The Micro-Scale Applications group explores the genetic makeup of … technology in order to enhance the quality of single-cell genomes and directly link functional information with … The JGI uniquely offers the first quantitative Stable Isotope Probing (SIP) Metagenomics …