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Publication Policy
… The purpose of this policy is to establish communication norms around JGI contributions, ensure … that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to produce manuscripts for publication and the responsibility for leading the efforts …
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Viral Genomics Group
… Microbes drive critical ecosystem functions and affect global nutrient cycling, however they do so under … involves both experimental and computational exploration of uncultivated viral diversity, characterization of molecular … While an ever-increasing number of phage and virus genomes have …
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Single Cell Research Group
… Research in the Woyke laboratory focuses on the utility of single-cell methods to access genetic material of uncultivated taxa of interest. One such effort is targeted … Phylogenetic diversity estimates show that the gap between cultivated and uncultivated Bacteria and Archaea has …
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Microbial Program
… The JGI’s Microbial Program focuses on using cutting-edge sequencing, annotation and … vast and diverse world of microbes. Studying bacteria and archaea, including those associated with microeukaryotes, … The Microbial Program focuses on using advanced sequencing technologies …
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New Lineages of Life Group
… Our research is focused on the discovery and characterization of novel bacterial, archaeal and eukaryotic microbes and viruses in … Exploring the fascinating world of giant viruses, which challenge our … Giant viruses challenge the traditional boundaries between viruses and cellular life, providing unique insights …
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Publications
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Microbiome Data Science Team
… Biology is currently experiencing a revolution brought on by rapid developments in genomics and other omics technologies.  The exponential growth of DNA … The research efforts of the group have concentrated in demonstrating … hundreds of thousands of new viral genomes and their predicted hosts (Nature 2016, Science 2017, Nature …
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Environmental Genomics Group
… Research in the Eloe-Fadrosh group focuses on using genome-resolved metagenomic approaches to identify and characterize genomic information from uncultivated microbes and viruses. We develop computational … Our research focuses on the assembly of metagenomic sequence data …
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Partnerships: Adopt-A-Genome
… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s … faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This … A primary purpose of this project is to bring educators from a … The Integrated Microbial Genomes & Microbiomes system ( IMG/M ) …
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A predicted CRISPR-mediated symbiosis between uncultivated archaea
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Natural Prodcast Episode 16: Marcy Balunas
… DAN: Hey Marcy!  ALISON: Hey Marcy?  MARCY: Hello. How’s it … that the squid is one– is we work on a lot of host-microbe symbiosis at this point. But the squid is probably the most … And we’ve done some work with those and have a couple of publications out there on the chemistry. There’s so much …
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Natural Prodcast Episode 10: A Primer on Genome Mining
… DAN UDWARY: You’re listening to the Department of Energy … the same sorts of things. And then, bacteria often live in symbiosis with plants and might actually be producing … and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, …
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