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Natural Prodcast Episode 11: Marnix Medema
… welcome back to Natural Prodcast, and this will be episode 11. This continues our little sprint on genome mining. In … talk and that now I can bring it to you. So enjoy, episode 11 of Natural Prodcast. Alison Takemura: Marnix, where are … a quick story. Looking back, the year was probably 2010, 2011, I was a, uh- actually, I’ve got the t-shirt on today. …
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Natural Prodcast Episode 23: Aaron Puri
… and an unusual acyl-homoserine lactone signal . mBio. 2023 Aug 31;14(4):e0101023. doi: 10.1128/mbio.01010-23. Publication: Cummings DA Jr. …
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Partnerships: Adopt-A-Genome
… recruit new talent for biosciences.  Adopt-a-Genome has:  11 CSU educators working with the JGI 120 genomes claimed … available datasets encompassing >150,000 isolate genomes, 230,000 metagenome-assembled genomes (MAGs), and 40,000+ … Xenorhabdus japonica DSM16522 R Robertson, et. al.  2023 . Microbiology Resource Announcements. 2023 12 (10), …
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Natural Prodcast Episode 24: Jackie Winter and SMC
… there a way to do that? DAN UDWARY: Well, so there’s good news and bad news on that. So one of the things that we’re … happening. And so we should have somewhere around 10, 11, 12 million BGCs in the database on the release, and … Metabolites Collaboratory SMC Workshop Materials from the 2023 JGI Annual Meeting Using the SMC Website API Endpoints …
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The unique metabolism of SAR11 aquatic bacteria
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SAR11 bacteria linked to ocean anoxia and nitrogen loss
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Diversity and biogeography of SAR11 bacteria from the Arctic Ocean
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Natural Prodcast Episode 10: A Primer on Genome Mining
… this is Challis et al, Chemistry and Biology, 2000, 211-224, 7:3 And so, you can then make predictions about … Microbiomes” paper is here . Read the associated JGI news release here . Software we discussed, used for genome …
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Single-cell enabled comparative genomics of a deep ocean SAR11 bathytype
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Complete genome sequence of Thermosphaera aggregans type strain (M11TLT)
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Single-cell genomics reveal low recombination frequencies in freshwater bacteria of the SAR11 clade
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FICUS
… useful tips for submitting a successful proposal. … The FY23 FICUS Open Call for Proposals describes the resources … available from all the facilities participating in the FY23 call, introduces the Eco-FAB resource, and contains …
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