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Natural Prodcast Episode 12: Nadine Ziemert
… … DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … of secondary metabolism. Welcome back. This will be episode 12 of Natural Prodcast. And it’s our conversation with … Europe. So if there are any kind of dated references to the news, that’s why. But it was a really fun conversation. And …
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CalTeach
CalTeach is a program for undergraduate majors interested in developing a deep understanding of … as well as a unique opportunity to complete a California K-12 science or math teaching credential as an undergraduate …
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Natural Prodcast Episode 24: Jackie Winter and SMC
… there a way to do that? DAN UDWARY: Well, so there’s good news and bad news on that. So one of the things that we’re … happening. And so we should have somewhere around 10, 11, 12 million BGCs in the database on the release, and that’s … Metabolites Collaboratory SMC Workshop Materials from the 2023 JGI Annual Meeting Using the SMC Website API Endpoints …
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Natural Prodcast Episode 7: Ben Shen
… right? BEN: Yeah, yeah. Well, we are at [10 to the] minus 12 [Molar concentration]- is sufficient to kill cells. So … called Mylotag. Wyeth was later acquired by Pfizer in 2009. So, a simple mistake, but I’m happy to be able to … So I wanted to ask you also about – because you were in the news recently – TSRI has acquired the Pfizer strain …
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Natural Prodcast Episode 10: A Primer on Genome Mining
… in Yu et al, APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2004, 1253–1262, 70:3 ALISON TAKEMURA: And so did you succeed in … Catalog of Earth’s Microbiomes. Nature  Biotechnology . 2020 Nov 9. doi: 10.1038/s41587-020-0718-6) The GEM catalog … Microbiomes” paper is here . Read the associated JGI news release here . Software we discussed, used for genome …
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Workforce Development & Education Outreach
The JGI aims to inspire more students to enter the STEM workforce by … program, a similar collaboration with AAMU was launched in 2024.  … The CalTeach Summer Research Institute (SRI) at UC … within the realm of education. … Through the Berkeley Lab K-12 program, the JGI collaborates with Biotech Partners to …
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Partnerships: Adopt-A-Genome
Adopt-a-Genome has:  11 CSU educators working with the JGI 120 genomes claimed (or about one per student) Seven … Xenorhabdus japonica DSM16522 R Robertson, et. al.  2023 . Microbiology Resource Announcements. 2023 12 (10), … Draft Genome Sequence of  Trichococcus flocculiformis DSM 2094T Isolated from Bulking Sludge in Germany. A. Amin, et. …
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CSP New Investigator Call
The CSP New Investigator Call is for investigators and research initiatives new to the JGI. Projects must be independent of ongoing JGI proposals, and lead PIs … on any previously accepted JGI CSP or FICUS proposal.   Competitive projects will provide pilot data to assess …
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New Lineages of Life Group
Our research is focused on the discovery and characterization of novel bacterial, archaeal and eukaryotic microbes and viruses in environmental sequence data. We use … available at Google Scholar. Schulz, C Abergel, T Woyke (2022) Giant virus biology and diversity in the era of …
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Natural Prodcast Episode 14: Nigel Mouncey
… never forced it on me, but we always had these scientific news magazines lying around at home. And I would just pick … takes about 10 years. Costs are in the range of $100 to $120 million to do that.  DAN: OK. So about the same amount … Non-model Bacteria Check out the agenda for the JGI’s 2021 Annual Genomics of Energy & Environment Meeting   …
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Complete Genome Sequence of the Aerobic Marine Methanotroph Methylomonas methanica MC09
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Natural Prodcast Episode 23: Aaron Puri
… … DAN: Hey, everybody. Welcome back for another episode of Natural Prodcast. Right now … access to the whole sigma catalog of precursors in their 12C form. You can feed those and look for incorporation in … and an unusual acyl-homoserine lactone signal . mBio. 2023 Aug 31;14(4):e0101023. doi: 10.1128/mbio.01010-23. …
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