An enhanced version of Phytozome.net, a web portal for comparative plant genomics geared to advance biofuel, food, feed, and fiber research, has been released by the U.S. Department of Energy (DOE) Joint Genome Institute (JGI). Phytozome provides a central “hub” for web access to a rapidly growing number of plant genomes, and includes tools for…
“JGI Updates Microbial Genomes Resource”
The US Department of Energy’s Joint Genome Institute has released an updated microbial genomics resource for researchers that now includes reference genomes and metagenomic data, JGI said Tuesday. The Integrated Microbial Genomes system with Microbiomes (IMG/M) 2.8 contains tools for analysis of microbial communities based on their metagenome sequence, within the context of reference isolate…
“Agaricus bisporus linkage maps sent to JGI”
For more details, refer to this message from Mike Challen at the University of Warwick.
“Craig Venter Has Algae Biofuel in Synthetic Genomics’ Pipeline”
In his Joint Genome Institute keynote speech in March, Venter said “the new algae” is something that “secretes whatever lipid size we want to engineer. This changes algae from what everybody’s been looking at as a farming problem into a manufacturing problem. So we are trying to get algae to go into a continuous production…
“Expanded Version of Phytozome.net Released by DOE JGI”
Phytozome, accessible to the public at www.phytozome.net, is a collaboration between scientists at the DOE JGI, Lawrence Berkeley National Laboratory, and the University of California, Berkeley Center for Integrative Genomics. It was developed with funding from the Department of Energy, the National Science Foundation, the National Institutes of Health, and the Gordon and Betty Moore…
Integrated Microbial Genomes Expert Review Goes Primetime
Scientists at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI) and the Biological Data Management and Technology Center (BDMTC) at Lawrence Berkeley National Laboratory have launched the Expert Review (ER) version of the Integrated Microbial Genomes (IMG) system. IMG ER supports and enhances the review and revision of annotations for both publicly available…
“DOE JGI releases expanded version of Phytozome.net”
An enhanced version of Phytozome.net, a web portal for comparative plant genomics geared to advance biofuel, food, feed, and fiber research, has been released by the U.S. Department of Energy (DOE) Joint Genome Institute (JGI). Phytozome provides a central “hub” for web access to a rapidly growing number of plant genomes, and includes tools for…
“DOE JGI releases expanded version of Phytozome.net”
Phytozome provides a central “hub” for web access to a rapidly growing number of plant genomes, and includes tools for visualization of plant genomes and associated annotations, sequence analysis, and bulk, as well as targeted, plant data retrieval. The gene families available in Phytozome, defined at several evolutionarily significant epochs, provide a framework for the…
“Integrated microbial genomes expert review goes primetime”
Scientists at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI) and the Biological Data Management and Technology Center (BDMTC) at Lawrence Berkeley National Laboratory have launched the Expert Review (ER) version of the Integrated Microbial Genomes (IMG) system. IMG ER supports and enhances the review and revision of annotations for both publicly available…
“Hands-on research inspires freshman biology students”
At the beginning of her first quarter at UC Santa Cruz, freshman biology student Kimberly Davis collected some soil from the forest floor near Thimann Labs. She then isolated a bacterial virus from the soil, took pictures of it with an electron microscope, extracted the virus’s DNA, sent it off for sequencing by the national…