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IMG Group
The IMG group owns and maintains integral components of JGI’s … data and serving them to users via the Integrated Microbial Genomes & Microbiomes (IMG/M) system. Research Team    … The Integrated Microbial Genomes group is focused on:  Developing state-of-the-art …
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Natural Prodcast Episode 11: Marnix Medema
… better to do it together, to join forces instead of to make two competing tools. If we had known about your tool, Dan, … have contacted you as well and we could have made an even bigger and better for eventually one of antiSMASH with the … really streamlined this whole process and made it so much faster than it was before. And then, well, this also became …
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Natural Prodcast Episode 14: Nigel Mouncey
… on the way – I’m going to try to keep them coming out every two weeks for a while – so I hope you’ll be listening. But … they merged with Beecham and SmithKline and became a much bigger company. But, yeah, he was mucking around with … responsible for coming up with new strains and new process improvements and new ways to recover spinosyns. And so we …
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Natural Prodcast Episode 12: Nadine Ziemert
… saw this structure and how that would make the compound faster or something like that. So that was interesting to … I find different stuff? So really answering some of these bigger questions. But I don’t know how much I would have … ideas on how to do that tomorrow, because it does take some improvements on things. So from your perspective on genome …
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Natural Prodcast Episode 10: A Primer on Genome Mining
UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about natural … could be a couple of decades away. But things are moving faster all the time. And a classical example of when this … lots of stuff. On average, we had something– I think we had two biosynthetic clusters per MAG, which is pretty good …
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Natural Prodcast Episode 7: Ben Shen
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the … Moving forward, I’m hoping to get a new one out every two weeks. This time, we’ve got a great interview with Ben … So, this collection is really a collection of half of the bigger pharma in the United States. It goes way back, …
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Natural Prodcast Episode 24: Jackie Winter and SMC
Not one of our normal interviews, but instead it’s two interviews in one. My new co-host, Jackie Winter, has … Breaking Bad, I guess. But no, you trained me in how to genome mine, so thank you for that. And you had to put up … going to ask. So this is a repository of BGCs from public databases. And so what if a researcher– like, my lab, we …
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Microbial Program
… driven prioritization lists for laboratory isolation and genome sequencing of underexplored bacterial and archaeal … catalog : Beyond minimal draft and improved draft microbial genomes the program offers single-cell sequencing, … directly isolated from environmental samples.  … The IMG/M system serves as a community resource for comparative …
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JGI Portals
… of our users. … Download plant, algal, fungal and microbial genomes and metagenomes — top-quality genomic data, open to … Genome Portal provides unified access to all JGI genomic databases and analytical tools for all JGI sequencing … and their associated metadata, around the world. … The IMG/M system serves as a community resource for comparative …
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Partnerships: Adopt-A-Genome
… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s unpublished microbial genomes, with the expectation that faculty will work with … biological insights from sequence data, employing IMG data and tools for comparative analysis, visualization …
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Natural Prodcast Episode 20: Brian Bachmann
… and look for cytotoxicity, do you think it would be faster than that? DAN UDWARY: Yeah, yeah, yeah. Yeah, I … We can also genetically manipulate them. We can do strain improvements. We can do all sorts of things. So that’s just … specific biosynthetic pathway. I guess how does this get bigger? Do you feel like you just have to know a pathway and …
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JGI Advisory Committees Code of Conduct
… staff members of the US Department of Energy (DOE) Joint Genome Institute (JGI) commit to Lawrence Berkeley National … publicly about JGI or on behalf of the JGI. We stand stronger in partnership with you in support of team science …
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