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Microbial Program
The JGI’s Microbial Program focuses on using cutting-edge sequencing, … Studying bacteria and archaea, including those associated with microeukaryotes, enhances our understanding of … driven prioritization lists for laboratory isolation and genome sequencing of underexplored bacterial and archaeal …
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Metagenome Program
The Metagenome Program uses advanced sequencing technologies to … genetic elements. Beyond exploring and characterizing microbial diversity, work in the Metagenome Program uses … metabolic functional potential. This research enables us to better understand how microbial communities contribute to …
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IMG Group
… genomic data and serving them to users via the Integrated Microbial Genomes & Microbiomes (IMG/M) system. Research Team    … The … and exa- scales on multicore and many core architectures with the ultimate objective of facilitating omics-based …
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Partnerships: Adopt-A-Genome
… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s unpublished microbial genomes, with the expectation that faculty will work with …
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Natural Prodcast Episode 10: A Primer on Genome Mining
UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about natural … those results heading? Toward an application, toward just better understanding fungal biosynthesis? DAN UDWARY: Yeah, … of the IMG data portal , which is a larger portal for microbial genomics. IMG stands for Integrated Microbial …
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Environmental Genomics Group
Research in the Eloe-Fadrosh group focuses on using genome-resolved metagenomic approaches to identify and … of metagenomes for signatures of viruses and novel microbial lineages, and reconstruct metabolic properties … fully capture microbial and viral diversity, leading to a better understanding of microbial communities and ecosystem …
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Products
Fungal Minimal Draft Lower coverage short-read whole genome shotgun sequencing Assembly, annotation ( Mycocosm ) … physical separation of a biologically relevant unit from a microbial community, such as a microcolony, microbial … DNA (no iTag sequencing) Assembly, annotation ( IMG/M ), binning 154/217 Metagenome Standard Draft Short-read …
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Genome Insider
Genome Insider is a podcast that showcases the work of JGI collaborators in brief forays, connecting audiences with the people behind the science. Hear diverse voices in science talk about their groundbreaking research to better understand — and harness — the superpowers encoded in …
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FICUS
… applications will focus on high-risk/high-payoff proposals within the focused topic areas that can be completed on an accelerated timeline as compared with the standard CSP projects. In addition, they must … samples of the spatial, temporal, taxonomic (environmental, microbial, plants, invertebrate, and vertebrate), and …
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JGI Portals
… demands of our users. … Download plant, algal, fungal and microbial genomes and metagenomes — top-quality genomic data, open to … over 15 million viral genomes and fragments, enriched with functional annotation, taxonomic classification, and …
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Natural Prodcast Episode 1: The Primer, Part 1
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the … things so that when we talk to other scientists, we have a better idea of what’s going on and what the context for … right. So I did a PhD in microbiology at MIT, and I studied microbial ecology. I studied Vibrio species in the ocean, so …
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DNA Synthesis Program
… been a pioneering effort in functional genomics since 2012, with a focus on addressing critical energy and environmental … the DOE's vision for a sustainable, bio-based economy. … Genome to Enzymes and Pathways focuses on discovering and … … Synthesis Capabilities & Offerings … BOOST … Integrated Microbial Genomes and Microbiomes … Mycocosm … Phytozome … …
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