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Workforce Development & Education Outreach
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Synthesis
… : a user science group dedicated to user project design, assembly, and quality control Strain Engineering Group : a … workflow management and novel automations for DNA design, assembly and analysis Overview of synthesis products The JGI … … gRNA-SeqRET … BOOST … Synthesis Platform Lead … More Resources … Software Engineers in the Synthetic Biology …
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Plant Program
… compounds.  The program is working to expand genomic resources for key plant species, enhancing our understanding … gene discovery. BrachyPan on Phytozome (see Brachypodium Resources below) PennyPan on Phytozome SorghumPan on … for very large-scale single genomes, based on the JGI assembly tool meraculous. It is now available for both …
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Meeting Code of Conduct
… are expected to comply immediately. Expected behavior:  Exercise consideration and respect in your speech and …
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Metagenome Program
… is to develop a deeper understanding of microbial community assembly and microbial interactions, including … focuses on developing computational tools and visualization resources that support user analysis of … and Microbiomes … Integrated Microbial Genomes and Virus Resources … Integrated Microbial Genomes and Plasmid …
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Synthetic Biology Lab
… synthetic biology applications group. The DNA synthesis and assembly group: Our production group operates as user … to provide access to state-of-the-art DNA synthesis and assembly technologies to the broader community.  We focus … We have developed and continue to improve automated assembly pipelines bringing in new technologies, in …
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Data Policy & Support
… … Read more about our data management practices and the resources we provide. … Read our research integrity and data … at the JGI … JGI Scientist Code of Conduct … Additional Resources  …
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Products
Lower coverage short-read whole genome shotgun sequencing Assembly, annotation ( Mycocosm ) 256/404 Fungal Standard … will be improved based on feasibility and scientific merit Assembly, annotation ( Mycocosm ) 256/404 Fungal … on genome characteristics, availability of external resources and project goals. Selected genomes will be …
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FICUS-NERSC/KBASE
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Partnerships: Adopt-A-Genome
… new talent for biosciences.  Adopt-a-Genome has:  11 CSU educators working with the JGI 120 genomes claimed (or about … … A primary purpose of this project is to bring educators from a broad range of disciplines up-to-speed with … … Access to the microbial genomes and associated resources/tutorials is freely available, and any faculty …
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FICUS
Photon Source Capabilities for FICUS Research describes the resources available from all the facilities participating in the FY25 call, introduces the resources available from the Advanced Photon Source, and … … The FY23 FICUS Open Call for Proposals describes the resources available from all the facilities participating in …
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Publication Policy
… data, DNA synthesized, and any other contributions, such as assembly, analysis, annotation, verification, creation of … (proposal: INSERT PROPOSAL AWARD DOI(S) HERE) and used resources at the DOE Joint Genome Institute ( … (proposal: INSERT PROPOSAL AWARD DOI(S) HERE) and used resources at the DOE Joint Genome Institute (JGI) ( …
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