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… does some really exciting work there. And I thought, well, why don’t we try to go to Alaska and see what we can find … with any kind of gene cluster identification, doing it with sequence alone you have to have some kind of a template to … I think, for the fungus garden and some of the bacterial symbionts. And so of course, the work that we’re doing is …

…   Our Sequencing Technologies Group is well-integrated across JGI departments to ensure a robust offering of sequencing capabilities and products to our … through end-to-end automation — and further advancing sequence applications, single cell genomics, DNA synthesis, …

… Our research is focused on the discovery and characterization of novel bacterial, archaeal and eukaryotic microbes and viruses in environmental sequence data. We use multi-omics (metagenomics, … Exploring the fascinating world of giant viruses, which challenge our understanding of viral …

… When submitting sequences to the JGI DNA Synthesis program, please include the following items: … Sequence files for all constructs should be emailed to  Miranda Harmon-Smith, Synthetic Biology Project … several easy-to-use open source tools for converting DNA sequence files into well-formed GenBank files. ApE is an …

… The Fungal & Algal Program explores the vast diversity of fungi and … and bioproducts. By sequencing and analyzing the genomes of these organisms, the program investigates the biological … and advanced genomic analysis to explore the rich diversity of fungi and algae. These organisms play a critical role in …

… “Adopt a Genome” is an informal program for faculty to … work with undergraduates in the analysis and publication of the claimed genome sequences. This opportunity, provided by the Joint Genome … necessary to extract meaningful biological insights from sequence data, employing IMG data and tools for comparative …

… at genomes and seeing where the really hard things to sequence were, and wondering what those … what those were … functional was these secondary metabolite pathways. So why was that? What is it about secondary metabolite pathways … and in some cases of really extremely small genomes, like symbionts that can’t live without their host. They have no …

… Research in the Woyke laboratory focuses on the utility of single-cell methods to access genetic material of uncultivated taxa of interest. One such effort is … is also reflected in the strongly biased representation of sequenced genomes in the public domain, the bulk of which …

… least, talk to us, first about my definitions of things and why I am wrong, and also talk about some of the great … in very highly coevolved systems where a microbe becomes a symbiont, for example, of an ant. So these are very stable … to approach it is more related to what JGI does, which is sequence genomes. And we just published last year in the …

… Below is a brief description of the process needed to prepare and ship samples for sequencing by the JGI.  Additionally it … 1) Review JGI sample QC requirements and protocols Obtaining DNA and RNA of suitable quantity and quality has been the rate-limiting … samples to the JGI. PI sends Project Manager (PM) a list of organism names (or for metagenomes, sample names).  Need …

… other things. And we know lots more about microbiomes and symbionts that live with other organisms, and often it’s the … DAN: Alright, so I think we’ve covered a little bit about why they’re important. But one of the things I did want to … live in the root nodules of plants. And these guys were sequenced, and you can see that different Frankia have …

… As a National User Facility, the JGI serves more than 2,500 … joined the JGI in 2017, he brought with him 20 years of industry experience — and an opportunity to expand the JGI’s portfolio of user companies. Now the Department of Energy is uniting … Our User Programs entail a competitive, proposal-based process including …