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…   Our Sequencing Technologies Group is well-integrated across JGI departments to ensure a robust … through end-to-end automation — and further advancing sequence applications, single cell genomics, DNA synthesis, … An assay used for profiling transcription factor binding …

… DAN: You’re listening to the US Department of Energy Joint … DAN: Alright, so I think we’ve covered a little bit about why they’re important. But one of the things I did want to … live in the root nodules of plants. And these guys were sequenced, and you can see that different Frankia have …

… DAN: Hey Marcy!  ALISON: Hey Marcy?  MARCY: Hello. How’s it … does some really exciting work there. And I thought, well, why don’t we try to go to Alaska and see what we can find … with any kind of gene cluster identification, doing it with sequence alone you have to have some kind of a template to …

… When submitting sequences to the JGI DNA Synthesis program, please include the following items: … Sequence files for all constructs should be emailed to  Miranda Harmon-Smith, Synthetic Biology Project Manager . … several easy-to-use open source tools for converting DNA sequence files into well-formed GenBank files. ApE is an …

… DAN: You’re listening to the US Department of Energy Joint … the paradigm of how to discover natural products. So, why I’m very excited to be working with Dan, you, with the … develop enabling technologies. ie how to translate the ATGC sequence into discrete small molecules. So, Dan, I’m very …

… Our research is focused on the discovery and characterization of … and eukaryotic microbes and viruses in environmental sequence data. We use multi-omics (metagenomics, … investigate the coding potential to find novel functions that may impact microbiome structure and biogeochemical …

… DAN UDWARY: You’re listening to the Department of Energy … least, talk to us, first about my definitions of things and why I am wrong, and also talk about some of the great … to approach it is more related to what JGI does, which is sequence genomes. And we just published last year in the …

… DAN UDWARY: You’re listening to the Department of Energy … there are any kind of dated references to the news, that’s why. But it was a really fun conversation. And I think … it would work, but we actually found fosmids. And we sequenced the whole fosmid at the time with Sanger …

… With collaborative user projects, the JGI’s Plant Program delves into … carbon, detoxifying soils, interacting with other organisms, and adapting to environmental changes. The program … facing humanity. A major focus are biofuel feedstock species and plant-microbe interactions, advancing efforts to …

… DAN UDWARY: You’re listening to the Department of Energy … more than 50,000 genomes that we derived from meta-genome sequences. As always, you’ll find transcripts and show notes … for us– what organisms people use for genome mining, why it’s called genome mining, how the biosynthetic gene …

… Below is a brief description of the process needed to prepare and ship samples for sequencing by the JGI.  Additionally it … 1) Review JGI sample QC requirements and protocols Obtaining DNA and RNA of … of a successful sequencing project. It is imperative that users properly assess DNA or RNA mass prior to shipment …

… DAN UDWARY: Hey, everyone! Welcome to the “Self Promotion … is like, what’s your origin story in natural products? Why are you doing this? JACLYN WINTER: I’ll kind of go back … have an E. coli strain that we’ve been working on that we sequenced the genome. And it has 17 resistant genes on a …