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The Fungal & Algal Program explores the vast diversity of fungi … cutting-edge sequencing technologies and advanced genomic analysis to explore the rich diversity of fungi and algae. … into bioenergy and bioproducts. The program’s fungal genomics research explores new metabolic processes and …

The Fungal & Algal Program Advisory Committees is chartered by … is chartered to render advice, guidance, and counsel on the effective management and strategic objectives of the … advisory panels and advocates of Program strategy, operations, and scientific relevance and quality. The Committee …

… that consists of coordinated hands-on experiments across fungal biology teaching labs. The purpose of the program is … 300+ students 800+ iNaturalist observations All MycoEd protocols, course materials and bioinformatics exercises are … through the links below. Naturalist Myco Ed Fungal Genomics Education Project MycoCosm MycoEd group page …

The User Support Analysis group provides computational analysis for new technology development and JGI user … focus areas being genome variation, transcriptomics and epigenomics. Our work varies in scope from the development of …

… cycle times from sample receipt to completion of standard analysis.  Raw data is provided for all sequencing products … to determine coverage of variants depends on project Fungal Minimal Draft Lower coverage short-read whole genome … based on feasibility and scientific merit.  Arizona Genomics Institute will produce HMW DNA needed for these …

… itself medicine, but the coding within the DNA codes for proteins that do the chemistry that put molecules together … streams. This will all become clearer as we get into the genomics. So– ALISON TAKEMURA: I’m just enjoying the ride … it has a really interesting biosynthetic pathway because fungal genes are cool. And if you like fungal genes, you …

… that faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. … with some of the latest developments in microbial genomics, metagenomics, and computational biology, and to … of submitting, getting feedback , and all the rules and protocols that go along with submitting a paper. That was …

Master’s student at the University of Groningen and then I wrote my own grant proposal in the hope that it would get … Marnix Medema: Yeah, exactly. There is no black and white in clustering in general in computer science. Dan … are protecting the plants against pathogens. So usually fungal or oomycete pathogens. In this case they worked on a …

… focuses on using cutting-edge sequencing, annotation and analysis techniques to explore the vast and diverse world of … single-cell sequencing, resequencing, RNA sequencing and epigenomics. Expansion of sequence space:  The JGI generates … and single cells. This effort uncovers novel genes, protein families, and pathways, enhancing our understanding …

Yeah, so any metabolite, produced by bacterial or fungal metabolism by microbes, will have a functional role. … be the amino acid that is relevant for the synthesis of proteins, and will more often end up in the active site of an … I think the important thing to remember is that, thanks to genomics, we now know that it is very hard to find stuff …

… diversity of cell types and associated organisms, including fungal and bacterial symbionts, detrimental microbial pathogens, and associated … are influenced by microbial partners. We use a variety of genomics-powered tools to study this complexity, including …

… including deep learning algorithms for gene annotation and protein folding models, to improve the accuracy of functional predictions and speed up genome analysis. Additionally, the Plant Program is advancing … on Phytozome … Phytozome is the JGI's Plant Comparative Genomics portal. Families of related genes representing the …