Publications

Shaffer, M. et al. (2020) DRAM for distilling microbial metabolism to automate the curation of microbiome function. Nucleic Acids Research. 10.1093/nar/gkaa621

Ouyang, Y. et al. (2020) Nitrite Oxidizer Activity and Community Are More Responsive Than Their Abundance to Ammonium-Based Fertilizer in an Agricultural Soil. Frontiers in Microbiology. 10.3389/fmicb.2020.01736

Sato, Y. et al. (2020) High-Quality Draft Genome Sequences of the Uncultured Delta3 Endosymbiont (Deltaproteobacteria) Assembled from Metagenomes of the Gutless Marine Worm Olavius algarvensis. Microbiology Resource Announcements. 10.1128/mra.00704-20

Gordon, S. P. et al. (2020) Gradual polyploid genome evolution revealed by pan-genomic analysis of Brachypodium hybridum and its diploid progenitors. Nature Communications. 10.1038/s41467-020-17302-5

Saint-Vincent, P. M. et al. (2020) Isolation, Characterization, and Pathogenicity of Two Pseudomonas syringae Pathovars from Populus trichocarpa Seeds. Microorganisms. 10.3390/microorganisms8081137

Wang, B. et al. (2020) CRAGE-Duet Facilitates Modular Assembly of Biological Systems for Studying Plant–Microbe Interactions. ACS Synthetic Biology. 10.1021/acssynbio.0c00280

Zhou, R. et al. (2020) Sequencing and Analysis of the Sex Determination Region of Populus trichocarpa. Genes. 10.3390/genes11080843

Sieradzki et al. (2020) Measurement Error and Resolution in Quantitative Stable Isotope Probing: Implications for Experimental Design. mSystems. 10.1128/msystems.00151-20

Bowman, E. K. et al. (2020) Bidirectional titration of yeast gene expression using a pooled CRISPR guide RNA approach. Proceedings of the National Academy of Sciences of the United States of America. 10.1073/pnas.2007413117

Almeida, A. et al. (2020) A unified catalog of 204,938 reference genomes from the human gut microbiome. Nature Biotechnology. 10.1038/s41587-020-0603-3

Jarett, J. et al. (2020) Insights into the dynamics between viruses and their hosts in a hot spring microbial mat. The ISME Journal: Multidisciplinary Journal of Microbial Ecology. 10.1038/s41396-020-0705-4

Harrington, L. B. et al. (2020) A scoutRNA Is Required for Some Type V CRISPR-Cas Systems. Molecular Cell. 10.1016/j.molcel.2020.06.022