Publications

Bollmann, A. et al. (2013) Complete genome sequence of Nitrosomonas sp. Is79, an ammonia oxidizing bacterium adapted to low ammonium concentrations. Environmental Microbiome. 10.4056/sigs.3517166

Romano, C. et al. (2013) Comparative Genomic Analysis of Phylogenetically Closely Related Hydrogenobaculum sp. Isolates from Yellowstone National Park. Applied and Environmental Microbiology. 10.1128/aem.03591-12

Aylward, F. O. et al. (2013) Complete Genome of Enterobacteriaceae Bacterium Strain FGI 57, a Strain Associated with Leaf-Cutter Ant Fungus Gardens. Microbiology Resource Announcements. 10.1128/genomea.00238-12

Zhang, J. et al. (2013) Development of an integrated transcript sequence database and a gene expression atlas for gene discovery and analysis in switchgrass (Panicum virgatum L.). The Plant Journal. 10.1111/tpj.12104

Sentchilo, V. et al. (2013) Community-wide plasmid gene mobilization and selection. The ISME Journal: Multidisciplinary Journal of Microbial Ecology. 10.1038/ismej.2013.13

Murugapiran, S. K. et al. (2013) Whole Genome Sequencing of Thermus oshimai JL-2 and Thermus thermophilus JL-18, Incomplete Denitrifiers from the United States Great Basin. Microbiology Resource Announcements. 10.1128/genomea.00106-12

Geraldes, A. et al. (2013) A 34K SNP genotyping array for Populus trichocarpa: Design, application to the study of natural populations and transferability to other Populus species. Molecular Ecology Resources. 10.1111/1755-0998.12056

Clark, S. C. et al. (2013) ALE: a generic assembly likelihood evaluation framework for assessing the accuracy of genome and metagenome assemblies. Bioinformatics. 10.1093/bioinformatics/bts723

Manning, V. A. et al. (2013) Comparative Genomics of a Plant-Pathogenic Fungus, Pyrenophora tritici-repentis, Reveals Transduplication and the Impact of Repeat Elements on Pathogenicity and Population Divergence. G3: Genes, Genomes, Genetics. 10.1534/g3.112.004044

Novichkov et al. (2013) RegPrecise 3.0 – A resource for genome-scale exploration of transcriptional regulation in bacteria. BMC Genomics. 10.1186/1471-2164-14-745

Zaremba-Niedzwiedzka, K. et al. (2013) Single-cell genomics reveal low recombination frequencies in freshwater bacteria of the SAR11 clade. Genome Biology. 10.1186/gb-2013-14-11-r130

Zarzycki, J. et al. (2013) The crystal structures of the tri-functional Chloroflexus aurantiacus and bi-functional Rhodobacter sphaeroides malyl-CoA lyases and comparison with CitE-like superfamily enzymes and malate synthases. BMC Molecular and Cell Biology. 10.1186/1472-6807-13-28