Publications

Prestat, E. et al. (2014) FOAM (Functional Ontology Assignments for Metagenomes): a Hidden Markov Model (HMM) database with environmental focus. Nucleic Acids Research. 10.1093/nar/gku702

Lowry, D. B. et al. (2014) The genetics of divergence and reproductive isolation between ecotypes of Panicum hallii. New Phytologist. 10.1111/nph.13027

Yamamoto, K. et al. (2014) Complete Genome Sequence of Methanoregula formicica SMSPT, a Mesophilic Hydrogenotrophic Methanogen Isolated from a Methanogenic Upflow Anaerobic Sludge Blanket Reactor. Microbiology Resource Announcements. 10.1128/genomea.00870-14

Yamamoto, K. et al. (2014) Complete Genome Sequence of Methanolinea tarda NOBI-1T, a Hydrogenotrophic Methanogen Isolated from Methanogenic Digester Sludge. Microbiology Resource Announcements. 10.1128/genomea.00876-14

Wohlbach et al. (2014) Comparative Genomics of Saccharomyces cerevisiae Natural Isolates for Bioenergy Production. Genome Biology and Evolution. 10.1093/gbe/evu199

Roux, S. et al. (2014) Ecology and evolution of viruses infecting uncultivated SUP05 bacteria as revealed by single-cell- and meta-genomics. eLife. 10.7554/elife.03125

Cai, F. et al. (2014) Engineering Bacterial Microcompartment Shells: Chimeric Shell Proteins and Chimeric Carboxysome Shells. ACS Synthetic Biology. 10.1021/sb500226j

Evans, L. M. et al. (2014) Population genomics of Populus trichocarpa identifies signatures of selection and adaptive trait associations. Nature Genetics. 10.1038/ng.3075

Gan et al. (2014) Extensive remodeling of a cyanobacterial photosynthetic apparatus in far-red light. Science. 10.1126/science.1256963

Hedlund et al. (2014) Impact of single-cell genomics and metagenomics on the emerging view of extremophile “microbial dark matter”. Extremophiles. 10.1007/s00792-014-0664-7

Ghylin, T. W. et al. (2014) Comparative single-cell genomics reveals potential ecological niches for the freshwater acI Actinobacteria lineage. The ISME Journal: Multidisciplinary Journal of Microbial Ecology. 10.1038/ismej.2014.135

Kyrpides et al. (2014) Genomic Encyclopedia of Bacteria and Archaea: Sequencing a Myriad of Type Strains. PLOS Biology. 10.1371/journal.pbio.1001920