Publications

Knapp, D. G. et al. (2018) Comparative genomics provides insights into the lifestyle and reveals functional heterogeneity of dark septate endophytic fungi. Scientific Reports. 10.1038/s41598-018-24686-4

Fleming, E. J. et al. (2018) Insights into the Fundamental Physiology of the Uncultured Fe-Oxidizing Bacterium Leptothrix ochracea. Applied and Environmental Microbiology. 10.1128/aem.02239-17

Lee, L. L. et al. (2018) Genus-Wide Assessment of Lignocellulose Utilization in the Extremely Thermophilic Genus Caldicellulosiruptor by Genomic, Pangenomic, and Metagenomic Analyses. Applied and Environmental Microbiology. 10.1128/aem.02694-17

Perera, D. et al. (2018) Exploring the loblolly pine (Pinus taeda L.) genome by BAC sequencing and Cot analysis. Gene. 10.1016/j.gene.2018.04.024

Gao et al. (2018) Ecosystem Fabrication (EcoFAB) Protocols for The Construction of Laboratory Ecosystems Designed to Study Plant-microbe Interactions. Journal of Visualized Experiments. 10.3791/57170

Druzhinina, I. S. et al. (2018) Massive lateral transfer of genes encoding plant cell wall-degrading enzymes to the mycoparasitic fungus Trichoderma from its plant-associated hosts. PLOS Genetics. 10.1371/journal.pgen.1007322

Scott, K. M. et al. (2018) Genomes of ubiquitous marine and hypersaline Hydrogenovibrio, Thiomicrorhabdus and Thiomicrospira spp. encode a diversity of mechanisms to sustain chemolithoautotrophy in heterogeneous environments. Environmental Microbiology. 10.1111/1462-2920.14090

Mäkelä, M. R. et al. (2018) Draft Genome Sequence of the Basidiomycete White-Rot Fungus Phlebia centrifuga. Microbiology Resource Announcements. 10.1128/genomea.01414-17

Cox, R. S. et al. (2018) Synthetic Biology Open Language (SBOL) Version 2.2.0. Journal of Integrative Bioinformatics. 10.1515/jib-2018-0001

Emery, M. L. et al. (2018) Preferential retention of genes from one parental genome after polyploidy illustrates the nature and scope of the genomic conflicts induced by hybridization. PLOS Genetics. 10.1371/journal.pgen.1007267

Kliver et al. (2018) Assembly of the Boechera retrofracta Genome and Evolutionary Analysis of Apomixis-Associated Genes. Genes. 10.3390/genes9040185

Chiang, E. et al. (2018) Verrucomicrobia are prevalent in north-temperate freshwater lakes and display class-level preferences between lake habitats. PLOS ONE. 10.1371/journal.pone.0195112