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Natural Prodcast Episode 10: A Primer on Genome Mining
… DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s … producing molecules that are helpful to the plants. And so, understanding those broader environmental and ecological … to get involved in secondary metabolism more or even just starting to get involved, what might you recommend? DAN …
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Mining New Frontiers: The Critical Minerals and Materials Joint Call
… The Joint Genome Institute and the Molecular Foundry have launched … integrate genomics with nanoscale science, accelerating discoveries and developing transformative bio-based … technologies that address challenges in the sourcing, recovery, and utilization of critical minerals and …
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Understanding Wildfire Recovery, Starting in Soil
… look at the soil microbes present a year after a wildfire. The Science After a wildfire burns, recovery begins at the forest floor. Within the soil, a … extreme wildfires, more and more forests are under threat. Understanding which microbes in the soil persist after a …
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Viral Genomics Group
… critical ecosystem functions and affect global nutrient cycling, however they do so under strong constraints exerted by viruses. Research in the viral genomics group aims at improving our collective understanding of ecological and evolutionary parameters … have been assembled and reported from metagenomes, our understanding of the impacts of these viruses on microbiome …
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Natural Prodcast Episode 1: The Primer, Part 1
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … has recognized how important natural products are to understanding the natural environment, and so our Director, … is a chemical compound called geosmin that’s produced by soil bacteria that live all over the place. So that smell of …
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Environmental Genomics Group
… Research in the Eloe-Fadrosh group focuses on using genome-resolved metagenomic approaches to identify and … capture microbial and viral diversity, leading to a better understanding of microbial communities and ecosystem … genomes, which is of fundamental value to improving our understanding of microbial ecology and metabolism by …
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DOE Metrics
… FY 2026 DOE Metrics Sequencing Quarter Total Bases (Trillions) Operating Hours Goal  … % Goal   FY 2025 Total   700.0 1,144.186 163% 8,585 8,640 100.6% Q1 2025 175 190.304 109% 2,164 2,136 98.7% Q2 2025 … target is based on 98% of the total available hours.   FY 2022 DOE Metrics There were 2,243 unique* JGI users in …
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Natural Prodcast Episode 17: Cassandra Quave
… is Professor Cassandra Quave from Emory University, with joint appointments in the School of Medicine and College of … infrastructure available, especially to researchers just starting out as they’re trying to form collaborations in … educational initiatives and work with school children and understanding the plants and their environment. We also were …
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Natural Prodcast Episode 21: Elizabeth Parkinson
… right. Welcome back to Natural Prodcast. I did it. I’m keeping to my schedule. This should be coming out on the first … a lot of people hedge their way into natural products by starting out in synthesis and then discovering more-- … can do these small rings, and so I think we need a better understanding of that. We have a crystal structure, and …
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Institutional User Agreements
… starts with a User Agreement — before any work can begin, including the submission of samples for sequencing, or … identifies the type of work or specific proposal to be covered under the Agreement. The signing official must have … director or supervisor for the appropriate contact name, email address and phone number for the signing official. …
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Natural Prodcast Episode 2: The Primer, Part 2
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … of secondary metabolism in the environment, and, sort of, understanding – like we’ve talked about – how bacteria or … products because they’re easy to find. They grow in the soil. These are the same guys that produce geosmin. And so …
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Natural Prodcast Episode 6: Marc Chevrette
… DAN: You’re listening to the US. .Department of Energy Joint Genome … for antibiotics and the microbes that make them is in the soil. There’s … uh… there’s an issue there though, in that … for many millions, sometimes billions, of years. And understanding how those changes that evolution brokers are …
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